5I9E
Crystal structure of a nuclear actin ternary complex
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d5i9eb1 | Alpha and beta proteins (a/b) | Ribonuclease H-like motif | Actin-like ATPase domain | Actin/HSP70 | Actin | Yeast (Saccharomyces bayanus ) [TaxId: 4931 ], | SCOPe (2.08) |
D | d5i9ed1 | Alpha and beta proteins (a/b) | Ribonuclease H-like motif | Actin-like ATPase domain | Actin/HSP70 | Actin | Yeast (Saccharomyces bayanus ) [TaxId: 4931 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
E [auth H] | SCOP2 Family | HSA domain-like | 8049662 | 4006579 | SCOP2 (2022-06-29) |
E [auth H] | SCOP2 Superfamily | HSA domain-like | 8054020 | 3002265 | SCOP2 (2022-06-29) |
F [auth E] | SCOP2B Superfamily | HSA domain-like | 8054020 | 3002265 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Actin_1st | e5i9eA2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
A | Actin_2nd | e5i9eA1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
C | Actin_1st | e5i9eC1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
C | Actin_2nd | e5i9eC2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
B | Actin_1st | e5i9eB2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
B | Actin_2nd | e5i9eB1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
D | Actin_1st | e5i9eD1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_1st | ECOD (1.6) |
D | Actin_2nd | e5i9eD2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Actin_2nd | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.420.40 | Alpha Beta | 2-Layer Sandwich | Nucleotidyltransferase | domain 5 | CATH (4.3.0) |
A | 3.90.640.10 | Alpha Beta | Alpha-Beta Complex | Actin | Chain A, domain 4 | CATH (4.3.0) |
C | 3.30.420.40 | Alpha Beta | 2-Layer Sandwich | Nucleotidyltransferase | domain 5 | CATH (4.3.0) |
C | 3.90.640.10 | Alpha Beta | Alpha-Beta Complex | Actin | Chain A, domain 4 | CATH (4.3.0) |
B | 3.30.420.40 | Alpha Beta | 2-Layer Sandwich | Nucleotidyltransferase | domain 5 | CATH (4.3.0) |
B | 3.90.640.10 | Alpha Beta | Alpha-Beta Complex | Actin | Chain A, domain 4 | CATH (4.3.0) |
D | 3.30.420.40 | Alpha Beta | 2-Layer Sandwich | Nucleotidyltransferase | domain 5 | CATH (4.3.0) |
D | 3.90.640.10 | Alpha Beta | Alpha-Beta Complex | Actin | Chain A, domain 4 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00022 | Actin (Actin) | Actin | - | Family | |
PF00022 | Actin (Actin) | Actin | - | Family | |
E [auth H], F [auth E] | PF07529 | HSA domain (HSA) | HSA domain | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR020902 | Actin/actin-like conserved site | Conserved Site | |
IPR043129 | ATPase, nucleotide binding domain | Homologous Superfamily | |
IPR004000 | Actin family | Family | |
IPR020902 | Actin/actin-like conserved site | Conserved Site | |
IPR004001 | Actin, conserved site | Conserved Site | |
IPR043129 | ATPase, nucleotide binding domain | Homologous Superfamily | |
IPR004000 | Actin family | Family | |
E [auth H], F [auth E] | IPR000330 | SNF2, N-terminal | Domain |
E [auth H], F [auth E] | IPR001650 | Helicase, C-terminal domain-like | Domain |
E [auth H], F [auth E] | IPR014001 | Helicase superfamily 1/2, ATP-binding domain | Domain |
E [auth H], F [auth E] | IPR049730 | SNF2/RAD5-like, C-terminal helicase domain | Domain |
E [auth H], F [auth E] | IPR014012 | Helicase/SANT-associated domain | Domain |
E [auth H], F [auth E] | IPR038718 | SNF2-like, N-terminal domain superfamily | Homologous Superfamily |
E [auth H], F [auth E] | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |