Skip to main content

 5HM5 | pdb_00005hm5

Crystal structure of Topo-97, an N-terminal 97kDa fragment of topoisomerase V

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyHelix-hairpin-helix tandem 8039247 3000163 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyTopoisomerase V catalytic domain-like 8039252 3001992 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyHelix-hairpin-helix tandem 8039251 3000163 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyHelix-hairpin-helix tandem 8039248 3000163 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyHelix-hairpin-helix tandem 8039249 3000163 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APilOe5hm5A1 A: alpha arraysX: TIM beta/alpha-barrelH: TIM barrelsT: TIM barrelsF: PilOECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Topoisomerase V -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR049334Topoisomerase V, second (HhH)2 tandem domainDomain
IPR010994RuvA domain 2-likeHomologous Superfamily
IPR024065DNA topoisomerase V, catalytic domain superfamilyHomologous Superfamily
IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
IPR060101SAM-like helix-hairpin-helix tandemDomain
IPR055246Topoisomerase V, HHH domainDomain
IPR003583Helix-hairpin-helix DNA-binding motif, class 1Domain
IPR054066SAM domain-likeDomain