Crystal structure of the MrsD-Protein A fusion protein
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2B Superfamily | Homo-oligomeric flavin-containing Cys decarboxylases, HFCD | 8038162 | 3001775 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Bacterial immunoglobulin/albumin-binding domains | 8091639 | 3001373 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Bacterial immunoglobulin/albumin-binding domains | 8091639 | 3001373 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Homo-oligomeric flavin-containing Cys decarboxylases, HFCD | 8038162 | 3001775 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | Bacterial immunoglobulin/albumin-binding domains | 8091639 | 3001373 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | Homo-oligomeric flavin-containing Cys decarboxylases, HFCD | 8038162 | 3001775 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | Homo-oligomeric flavin-containing Cys decarboxylases, HFCD | 8038162 | 3001775 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | Bacterial immunoglobulin/albumin-binding domains | 8091639 | 3001373 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | B | e5h75A2 | A: alpha bundles | X: immunoglobulin/albumin-binding domain-like | H: Bacterial immunoglobulin/albumin-binding domains (From Topology) | T: Bacterial immunoglobulin/albumin-binding domains | F: B | ECOD (1.6) |
| A | Flavoprotein | e5h75A1 | A: a/b three-layered sandwiches | X: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD (From Topology) | H: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD (From Topology) | T: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD | F: Flavoprotein | ECOD (1.6) |
| B | B | e5h75B2 | A: alpha bundles | X: immunoglobulin/albumin-binding domain-like | H: Bacterial immunoglobulin/albumin-binding domains (From Topology) | T: Bacterial immunoglobulin/albumin-binding domains | F: B | ECOD (1.6) |
| B | Flavoprotein | e5h75B1 | A: a/b three-layered sandwiches | X: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD (From Topology) | H: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD (From Topology) | T: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD | F: Flavoprotein | ECOD (1.6) |
| D | B | e5h75D2 | A: alpha bundles | X: immunoglobulin/albumin-binding domain-like | H: Bacterial immunoglobulin/albumin-binding domains (From Topology) | T: Bacterial immunoglobulin/albumin-binding domains | F: B | ECOD (1.6) |
| D | Flavoprotein | e5h75D1 | A: a/b three-layered sandwiches | X: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD (From Topology) | H: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD (From Topology) | T: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD | F: Flavoprotein | ECOD (1.6) |
| C | B | e5h75C2 | A: alpha bundles | X: immunoglobulin/albumin-binding domain-like | H: Bacterial immunoglobulin/albumin-binding domains (From Topology) | T: Bacterial immunoglobulin/albumin-binding domains | F: B | ECOD (1.6) |
| C | Flavoprotein | e5h75C1 | A: a/b three-layered sandwiches | X: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD (From Topology) | H: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD (From Topology) | T: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD | F: Flavoprotein | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF02441 | Flavoprotein (Flavoprotein) | Flavoprotein | This domain is found in diverse flavoprotein enzymes, including covering the whole length of the sequence of epidermin biosynthesis protein from Staphylococcus epidermidis (EpiD, Swiss:P30197), which has been shown to bind FMN [1]. This enzyme cataly ... | Domain | |
| PF02216 | B domain (B) | B domain | This family contains the B domain of Staphylococcal protein A, which specifically binds to the Fc portion of immunoglobulin G. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR009063 | Immunoglobulin/albumin-binding domain superfamily | Homologous Superfamily | |
| IPR005877 | YSIRK Gram-positive signal peptide | Domain | |
| IPR036779 | LysM domain superfamily | Homologous Superfamily | |
| IPR005038 | Octapeptide repeat | Repeat | |
| IPR003132 | Protein A, Ig-binding domain | Domain | |
| IPR018392 | LysM domain | Domain | |
| IPR019931 | LPXTG cell wall anchor domain | Domain | |
| IPR036551 | Flavin prenyltransferase-like | Homologous Superfamily | |
| IPR003382 | Flavoprotein | Domain |














