5H75 | pdb_00005h75

Crystal structure of the MrsD-Protein A fusion protein


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B SuperfamilyBacterial immunoglobulin/albumin-binding domains 8091639 3001373 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyHomo-oligomeric flavin-containing Cys decarboxylases, HFCD 8038162 3001775 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyHomo-oligomeric flavin-containing Cys decarboxylases, HFCD 8038162 3001775 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyBacterial immunoglobulin/albumin-binding domains 8091639 3001373 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyBacterial immunoglobulin/albumin-binding domains 8091639 3001373 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyHomo-oligomeric flavin-containing Cys decarboxylases, HFCD 8038162 3001775 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyHomo-oligomeric flavin-containing Cys decarboxylases, HFCD 8038162 3001775 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyBacterial immunoglobulin/albumin-binding domains 8091639 3001373 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DBe5h75D2 A: alpha bundlesX: immunoglobulin/albumin-binding domain-likeH: Bacterial immunoglobulin/albumin-binding domains (From Topology)T: Bacterial immunoglobulin/albumin-binding domainsF: BECOD (1.6)
DFlavoproteine5h75D1 A: a/b three-layered sandwichesX: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD (From Topology)H: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD (From Topology)T: Homo-oligomeric flavin-containing Cys decarboxylases, HFCDF: FlavoproteinECOD (1.6)
CBe5h75C2 A: alpha bundlesX: immunoglobulin/albumin-binding domain-likeH: Bacterial immunoglobulin/albumin-binding domains (From Topology)T: Bacterial immunoglobulin/albumin-binding domainsF: BECOD (1.6)
CFlavoproteine5h75C1 A: a/b three-layered sandwichesX: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD (From Topology)H: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD (From Topology)T: Homo-oligomeric flavin-containing Cys decarboxylases, HFCDF: FlavoproteinECOD (1.6)
BBe5h75B2 A: alpha bundlesX: immunoglobulin/albumin-binding domain-likeH: Bacterial immunoglobulin/albumin-binding domains (From Topology)T: Bacterial immunoglobulin/albumin-binding domainsF: BECOD (1.6)
BFlavoproteine5h75B1 A: a/b three-layered sandwichesX: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD (From Topology)H: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD (From Topology)T: Homo-oligomeric flavin-containing Cys decarboxylases, HFCDF: FlavoproteinECOD (1.6)
ABe5h75A2 A: alpha bundlesX: immunoglobulin/albumin-binding domain-likeH: Bacterial immunoglobulin/albumin-binding domains (From Topology)T: Bacterial immunoglobulin/albumin-binding domainsF: BECOD (1.6)
AFlavoproteine5h75A1 A: a/b three-layered sandwichesX: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD (From Topology)H: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD (From Topology)T: Homo-oligomeric flavin-containing Cys decarboxylases, HFCDF: FlavoproteinECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF02441Flavoprotein (Flavoprotein)FlavoproteinThis domain is found in diverse flavoprotein enzymes, including covering the whole length of the sequence of epidermin biosynthesis protein from Staphylococcus epidermidis (EpiD, Swiss:P30197), which has been shown to bind FMN [1]. This enzyme cataly ...This domain is found in diverse flavoprotein enzymes, including covering the whole length of the sequence of epidermin biosynthesis protein from Staphylococcus epidermidis (EpiD, Swiss:P30197), which has been shown to bind FMN [1]. This enzyme catalyses the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance [2]. dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenyl-acrylic acid decarboxylase Swiss:P33751 (EC:4.1.1.-) [3].
Domain
A, B, C, D
PF02216B domain (B)B domainThis family contains the B domain of Staphylococcal protein A, which specifically binds to the Fc portion of immunoglobulin G. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
Mersacidin decarboxylase,Immunoglobulin G-binding protein A