5H6X
The crystal structure of RpoS fragment including a partial region 1.2 and region 2 from intracellular pathogen Legionella pneumophila
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF04542 | e5h6xA1 | A: alpha complex topology | X: Sigma2 domain-like | H: Sigma2 domain of RNA polymerase sigma factors (From Topology) | T: Sigma2 domain of RNA polymerase sigma factors | F: PF04542 | ECOD (1.6) |
B | PF00140,PF04542 | e5h6xB1 | A: alpha complex topology | X: Sigma2 domain-like | H: Sigma2 domain of RNA polymerase sigma factors (From Topology) | T: Sigma2 domain of RNA polymerase sigma factors | F: PF00140,PF04542 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00140 | Sigma-70 factor, region 1.2 (Sigma70_r1_2) | Sigma-70 factor, region 1.2 | - | Family | |
PF04542 | Sigma-70 region 2 (Sigma70_r2) | Sigma-70 region 2 | Region 2 of sigma-70 is the most conserved region of the entire protein. All members of this class of sigma-factor contain region 2. The high conservation is due to region 2 containing both the -10 promoter recognition helix and the primary core RNA ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR007627 | RNA polymerase sigma-70 region 2 | Domain | |
IPR000943 | RNA polymerase sigma-70 | Domain | |
IPR013325 | RNA polymerase sigma factor, region 2 | Homologous Superfamily | |
IPR013324 | RNA polymerase sigma factor, region 3/4-like | Homologous Superfamily | |
IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily | |
IPR014284 | RNA polymerase sigma-70 like domain | Domain | |
IPR009042 | RNA polymerase sigma-70 region 1.2 | Domain | |
IPR007630 | RNA polymerase sigma-70 region 4 | Domain | |
IPR007624 | RNA polymerase sigma-70 region 3 | Domain | |
IPR012761 | RNA polymerase sigma factor RpoS | Family |