Annotations: 5GQT

Crystal structure of a specifier Protein from Arabidopsis thaliana

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	ECH_1	e5gqtA1	A: beta barrels	X: P-loop domains-like	H: Immunoglobulin-related	T: HAD-like	F: ECH_1	ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.100.10.30	Mainly Beta	Aligned Prism	Vitelline Membrane Outer Layer Protein I, subunit A	Jacalin-like lectin domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF01419	Jacalin-like lectin domain (Jacalin)	Jacalin-like lectin domain	-	Repeat
A	PF01344	Kelch motif (Kelch_1)	Kelch motif	-	Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Nitrile-specifier protein 1	binding carbohydrate binding RNA binding nucleic acid binding mRNA binding lyase activity catalytic activity enzyme regulator activity molecular function regulator activity	carbohydrate derivative catabolic process catabolic process oxoacid metabolic process glucosinolate metabolic process glucosinolate catabolic process carbohydrate derivative metabolic process glycosyl compound catabolic process organic acid metabolic process sulfur compound catabolic process sulfur compound metabolic process metabolic process cellular process small molecule metabolic process S-glycoside catabolic process carbohydrate derivative catabolic process catabolic process oxoacid metabolic process glucosinolate metabolic process glucosinolate catabolic process carbohydrate derivative metabolic process glycosyl compound catabolic process organic acid metabolic process sulfur compound catabolic process sulfur compound metabolic process metabolic process cellular process small molecule metabolic process S-glycoside catabolic process nitrile biosynthetic process biosynthetic process nitrile metabolic process developmental process multicellular organismal process reproductive system development reproductive process multicellular organismal reproductive process developmental maturation developmental process involved in reproduction seed dormancy process multicellular organism development fruit development seed development anatomical structure development reproductive structure development post-embryonic development dormancy process seed maturation system development biological process involved in interspecies interaction between organisms response to stimulus response to other organism response to external stimulus response to external biotic stimulus response to biotic stimulus response to herbivore seed germination seedling development	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR033734	Jacalin-like lectin domain, plant	Domain
A	IPR001229	Jacalin-like lectin domain	Domain
A	IPR036404	Jacalin-like lectin domain superfamily	Homologous Superfamily
A	IPR035429	Nitrile-specifier protein 1/2/3	Family
A	IPR006652	Kelch repeat type 1	Repeat
A	IPR015915	Kelch-type beta-propeller	Homologous Superfamily

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.