5GNF | pdb_00005gnf

Crystal structure of anti-CRISPR protein AcrF3


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BEUF07974e5gnfB1 A: alpha arraysX: Thymine dioxygenase JBP1 DNA-binding domain-likeH: Cas3 inhibitor AcrF3 (From Topology)T: Cas3 inhibitor AcrF3F: EUF07974ECOD (1.6)
AEUF07974e5gnfA1 A: alpha arraysX: Thymine dioxygenase JBP1 DNA-binding domain-likeH: Cas3 inhibitor AcrF3 (From Topology)T: Cas3 inhibitor AcrF3F: EUF07974ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF21401Cas3 inhibitor AcrF3 (AcrF3)Cas3 inhibitor AcrF3AcrF3, a protein encoded by gene 35 from phage JBD5, has been reported to specifically inhibit the Cas3 protein of the P. aeruginosa PA14 strain (PaCas3) and to counteract the type I-F CRISPR-Cas system [1]. AcrF3 eluted as a dimer in gel-filtration ...AcrF3, a protein encoded by gene 35 from phage JBD5, has been reported to specifically inhibit the Cas3 protein of the P. aeruginosa PA14 strain (PaCas3) and to counteract the type I-F CRISPR-Cas system [1]. AcrF3 eluted as a dimer in gel-filtration chromatography [1]. In the complex structure, AcrF3 binds to PaCas3 at a ratio of 2:1, suggesting that AcrF3 functions as a homodimer that inhibits PaCas3 [1]. A single AcrF3 molecule has a two-layer architecture with six alpha-helices [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Uncharacterized protein AcrF3 - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR049085Cas3 inhibitor AcrF3-likeFamily