5GNA | pdb_00005gna

Crystal Structure of flagellin assembly related protein

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	FlgN-like	8092869	3001299	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	Stm1_N	e5gnaB01	A: a/b three-layered sandwiches	X: Rossmann-like	H: P-loop domains-related	T: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	F: Stm1_N	ECOD (v294.1)
A	Rogdi_lz	e5gnaA1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: Chelatase-like	F: Rogdi_lz	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.20.58.380	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF05400	Flagellar protein FliT (FliT)	Flagellar protein FliT	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B	Flagellar hook-associated protein 2	-	bacterial-type flagellum-dependent cell motility cellular process cell motility archaeal or bacterial-type flagellum-dependent cell motility cilium or flagellum-dependent cell motility cell adhesion	bacterial-type flagellum filament cap cell projection cellular anatomical structure organelle membraneless organelle bacterial-type flagellum filament bacterial-type flagellum extracellular region bacterial-type flagellum hook
A	Flagellar protein FliT	identical protein binding protein binding binding	cellular component organization bacterial-type flagellum organization organelle organization cell projection organization cellular process cellular component organization or biogenesis regulation of cellular component organization regulation of cellular process bacterial-type flagellum assembly negative regulation of biological process membraneless organelle assembly negative regulation of organelle assembly cellular component biogenesis cellular component assembly cellular component organization bacterial-type flagellum organization organelle organization cell projection organization cellular process cellular component organization or biogenesis regulation of cellular component organization regulation of cellular process bacterial-type flagellum assembly negative regulation of biological process membraneless organelle assembly negative regulation of organelle assembly cellular component biogenesis cellular component assembly negative regulation of cellular process negative regulation of cell projection organization regulation of bacterial-type flagellum assembly regulation of biological process organelle assembly negative regulation of cellular component organization regulation of cell projection assembly regulation of cell projection organization biological regulation regulation of cellular component biogenesis regulation of organelle organization negative regulation of organelle organization regulation of organelle assembly cell projection assembly negative regulation of bacterial-type flagellum assembly protein folding biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process gene expression macromolecule biosynthetic process protein maturation	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B	IPR040026	Flagellar hook-associated protein 2	Family
B	IPR010809	Flagellar hook-associated protein 2, C-terminal	Domain
B	IPR010810	Flagellin hook, IN motif	Conserved Site
B	IPR003481	Flagellar hook-associated protein 2, N-terminal	Domain
A	IPR008622	Flagellar protein FliT	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.