5GKO | pdb_00005gko

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	MacB_PCD	e5gkoB2	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: double psi	F: MacB_PCD	ECOD (1.6)
B	UNK_F_TYPE	e5gkoB4	A: alpha bundles	X: Type II ABC exporter transmembrane domain fold	H: Type II ABC exporter transmembrane domain-related	T: MacB transmembrane domain	F: UNK_F_TYPE	ECOD (1.6)
B	PRK10535	e5gkoB1	A: a+b two layers	X: Alpha-beta plaits	H: ferredoxin-like domain in periplasmic region of MacB (From Topology)	T: ferredoxin-like domain in periplasmic region of MacB	F: PRK10535	ECOD (1.6)
B	ABC_tran	e5gkoB3	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: ABC_tran	ECOD (1.6)
A	MacB_PCD	e5gkoA3	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: double psi	F: MacB_PCD	ECOD (1.6)
A	UNK_F_TYPE	e5gkoA4	A: alpha bundles	X: Type II ABC exporter transmembrane domain fold	H: Type II ABC exporter transmembrane domain-related	T: MacB transmembrane domain	F: UNK_F_TYPE	ECOD (1.6)
A	PRK10535	e5gkoA2	A: a+b two layers	X: Alpha-beta plaits	H: ferredoxin-like domain in periplasmic region of MacB (From Topology)	T: ferredoxin-like domain in periplasmic region of MacB	F: PRK10535	ECOD (1.6)
A	ABC_tran	e5gkoA1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: ABC_tran	ECOD (1.6)

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (utative)

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Macrolide export ATP-binding/permease protein MacB	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding transporter activity transmembrane transporter activity pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity ATP-dependent activity	-	protein-containing complex cellular anatomical structure transmembrane transporter complex membrane membrane protein complex transporter complex cell periphery plasma membrane

Chains	Accession	Name	Type
A, B	IPR050250	Macrolide Exporter MacB	Family
A, B	IPR017871	ABC transporter-like, conserved site	Conserved Site
A, B	IPR017911	MacB-like, ATP-binding domain	Domain
A, B	IPR003838	ABC3 transporter permease, C-terminal	Domain
A, B	IPR003439	ABC transporter-like, ATP-binding domain	Domain
A, B	IPR003593	AAA+ ATPase domain	Domain
A, B	IPR025857	MacB-like periplasmic core domain	Domain
A, B	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily

Chains	External Link	Type	Class	Superfamily	Family
A, B	OPM	Transmembrane	Alpha-helical polytopic	ABC transporters	FtsX-like permease

Chains	External Link	Comment
A, B	PDBTM	Annotated as membrane protein by PDBTM

Chains	External Link	Comment
A, B	MemProtMD	Annotated as membrane protein by MemProtMD

Chains	Resource Link	Group	Subgroup	Protein
A, B	mpstruc	TRANSMEMBRANE PROTEINS: ALPHA-HELICAL	ATP Binding Cassette (ABC) Transporters	MacB ABC transporter

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

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