5GKH | pdb_00005gkh

Structure of EndoMS-dsDNA2 complex


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BNucS_Ne5gkhB2 A: beta barrelsX: PH domain-likeH: NucS N-terminal domain (From Topology)T: NucS N-terminal domainF: NucS_NECOD (1.6)
BNucS_Ce5gkhB1 A: a/b three-layered sandwichesX: Restriction endonuclease-likeH: Restriction endonuclease-like (From Topology)T: Restriction endonuclease-likeF: NucS_CECOD (1.6)
ANucS_Ne5gkhA1 A: beta barrelsX: PH domain-likeH: NucS N-terminal domain (From Topology)T: NucS N-terminal domainF: NucS_NECOD (1.6)
ANucS_Ce5gkhA2 A: a/b three-layered sandwichesX: Restriction endonuclease-likeH: Restriction endonuclease-like (From Topology)T: Restriction endonuclease-likeF: NucS_CECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF21003Endonuclease NucS N-terminal PH-like domain (NucS_N)Endonuclease NucS N-terminal PH-like domainEndonuclease NucS cleaves both 3' and 5' ssDNA extremities of branched DNA structures and it binds to ssDNA [1,2]. This entry represents the N-terminal PH-like domain of NucS. Domain
A, B
PF01939Endonuclease NucS C-terminal domain (NucS_C)Endonuclease NucS C-terminal domainEndonuclease NucS cleaves both 3' and 5' ssDNA extremities of branched DNA structures and it binds to ssDNA [1,2]. This entry represents the C-terminal domain of NucS. Domain