Crystal Structure of Fe3+ - Desferal bound siderophore binding protein FhuD from Vibrio cholerae
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | Peripla_BP_2_N | e5ggxD1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Chelatase-like | F: Peripla_BP_2_N | ECOD (1.6) |
| D | UNK_F_TYPE | e5ggxD2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Chelatase-like | F: UNK_F_TYPE | ECOD (1.6) |
| C | Peripla_BP_2_N | e5ggxC1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Chelatase-like | F: Peripla_BP_2_N | ECOD (1.6) |
| C | UNK_F_TYPE | e5ggxC2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Chelatase-like | F: UNK_F_TYPE | ECOD (1.6) |
| B | Peripla_BP_2_N | e5ggxB1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Chelatase-like | F: Peripla_BP_2_N | ECOD (1.6) |
| B | UNK_F_TYPE | e5ggxB2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Chelatase-like | F: UNK_F_TYPE | ECOD (1.6) |
| A | Peripla_BP_2_N | e5ggxA1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Chelatase-like | F: Peripla_BP_2_N | ECOD (1.6) |
| A | UNK_F_TYPE | e5ggxA2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Chelatase-like | F: UNK_F_TYPE | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| D | 3.40.50.1980 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Nitrogenase molybdenum iron protein domain | CATH (4.2.0) |
| C | 3.40.50.1980 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Nitrogenase molybdenum iron protein domain | CATH (4.2.0) |
| B | 3.40.50.1980 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Nitrogenase molybdenum iron protein domain | CATH (4.2.0) |
| A | 3.40.50.1980 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Nitrogenase molybdenum iron protein domain | CATH (4.2.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF01497 | Periplasmic binding protein (Peripla_BP_2) | Periplasmic binding protein | This is sensor domain found in bacterial periplasmic binding proteins, several of which are involved in iron and cobalamin transport [1,2,3]. Among its ligands are siderophores bacillibactin, enterobactin and iron(III)-hydroxamates (Matilla et. al., ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Iron(III) ABC transporter, periplasmic iron-compound-binding protein | - |
