Thermus thermophilus V/A-ATPase, conformation 2
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| M | SCOP2B Superfamily | V-type ATP synthase subunit C | 8040383 | 3000323 | SCOP2B (2022-06-29) |
| L | SCOP2B Superfamily | AtpF-like | 8033711 | 3000828 | SCOP2B (2022-06-29) |
| J | SCOP2B Superfamily | VAPG-like | 8101875 | 3002722 | SCOP2B (2022-06-29) |
| I | SCOP2B Superfamily | VAPG-like | 8101875 | 3002722 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8018298 | 3001034 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018301 | 3002019 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8018298 | 3001034 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018301 | 3002019 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8018298 | 3001034 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018301 | 3002019 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8018290 | 3001034 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018285 | 3002019 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056935 | 3000684 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | Single hybrid motif | 8018293 | 3001880 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018285 | 3002019 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056935 | 3000684 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8018290 | 3001034 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Single hybrid motif | 8018293 | 3001880 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018285 | 3002019 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056935 | 3000684 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Single hybrid motif | 8018293 | 3001880 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8018290 | 3001034 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| Z | Helicase_C | e5gasZ1 | A: a/b three-layered sandwiches | X: CXXC domain-like | H: CXXC domain | T: CXXC domain | F: Helicase_C | ECOD (v294.1) |
| Y | Helicase_C | e5gasY1 | A: a/b three-layered sandwiches | X: CXXC domain-like | H: CXXC domain | T: CXXC domain | F: Helicase_C | ECOD (v294.1) |
| X | Helicase_C | e5gasX1 | A: a/b three-layered sandwiches | X: CXXC domain-like | H: CXXC domain | T: CXXC domain | F: Helicase_C | ECOD (v294.1) |
| W | Helicase_C | e5gasW1 | A: a/b three-layered sandwiches | X: CXXC domain-like | H: CXXC domain | T: CXXC domain | F: Helicase_C | ECOD (v294.1) |
| V | Helicase_C | e5gasV1 | A: a/b three-layered sandwiches | X: CXXC domain-like | H: CXXC domain | T: CXXC domain | F: Helicase_C | ECOD (v294.1) |
| U | Helicase_C | e5gasU1 | A: a/b three-layered sandwiches | X: CXXC domain-like | H: CXXC domain | T: CXXC domain | F: Helicase_C | ECOD (v294.1) |
| T | Helicase_C | e5gasT1 | A: a/b three-layered sandwiches | X: CXXC domain-like | H: CXXC domain | T: CXXC domain | F: Helicase_C | ECOD (v294.1) |
| S | Helicase_C | e5gasS1 | A: a/b three-layered sandwiches | X: CXXC domain-like | H: CXXC domain | T: CXXC domain | F: Helicase_C | ECOD (v294.1) |
| R | Helicase_C | e5gasR1 | A: a/b three-layered sandwiches | X: CXXC domain-like | H: CXXC domain | T: CXXC domain | F: Helicase_C | ECOD (v294.1) |
| Q | Helicase_C | e5gasQ1 | A: a/b three-layered sandwiches | X: CXXC domain-like | H: CXXC domain | T: CXXC domain | F: Helicase_C | ECOD (v294.1) |
| P | Helicase_C | e5gasP1 | A: a/b three-layered sandwiches | X: CXXC domain-like | H: CXXC domain | T: CXXC domain | F: Helicase_C | ECOD (v294.1) |
| O | Helicase_C | e5gasO1 | A: a/b three-layered sandwiches | X: CXXC domain-like | H: CXXC domain | T: CXXC domain | F: Helicase_C | ECOD (v294.1) |
| N | Usher | e5gasN2 | A: a/b three-layered sandwiches | X: Inserted helical domain in fatty acid synthase subunit beta | H: Voltage-gated ion channels | T: Voltage-gated ion channels | F: Usher | ECOD (v294.1) |
| M | ubiquitin | e5gasM1 | A: a/b three-layered sandwiches | X: HTH | H: SH3 | T: SH3 | F: ubiquitin | ECOD (v294.1) |
| L | ubiquitin | e5gasL1 | A: a/b three-layered sandwiches | X: HTH | H: SH3 | T: SH3 | F: ubiquitin | ECOD (v294.1) |
| K | ubiquitin | e5gasK1 | A: a/b three-layered sandwiches | X: HTH | H: SH3 | T: SH3 | F: ubiquitin | ECOD (v294.1) |
| J | GST_N_2 | e5gasJ1 | A: a/b three-layered sandwiches | X: HTH | H: Baseplate wedge protein gp6 helical domain | T: Baseplate wedge protein gp6 helical domain | F: GST_N_2 | ECOD (v294.1) |
| I | GST_N_2 | e5gasI1 | A: a/b three-layered sandwiches | X: HTH | H: Baseplate wedge protein gp6 helical domain | T: Baseplate wedge protein gp6 helical domain | F: GST_N_2 | ECOD (v294.1) |
| H | GST_N_2 | e5gasH1 | A: a/b three-layered sandwiches | X: HTH | H: Baseplate wedge protein gp6 helical domain | T: Baseplate wedge protein gp6 helical domain | F: GST_N_2 | ECOD (v294.1) |
| G | GST_N_2 | e5gasG1 | A: a/b three-layered sandwiches | X: HTH | H: Baseplate wedge protein gp6 helical domain | T: Baseplate wedge protein gp6 helical domain | F: GST_N_2 | ECOD (v294.1) |
| F | GST_N_2 | e5gasF1 | A: a/b three-layered sandwiches | X: HTH | H: Baseplate wedge protein gp6 helical domain | T: Baseplate wedge protein gp6 helical domain | F: GST_N_2 | ECOD (v294.1) |
| E | GST_N_2 | e5gasE1 | A: a/b three-layered sandwiches | X: HTH | H: Baseplate wedge protein gp6 helical domain | T: Baseplate wedge protein gp6 helical domain | F: GST_N_2 | ECOD (v294.1) |
| D | GST_N_2 | e5gasD1 | A: a/b three-layered sandwiches | X: HTH | H: Baseplate wedge protein gp6 helical domain | T: Baseplate wedge protein gp6 helical domain | F: GST_N_2 | ECOD (v294.1) |
| C | ATP-synt_VA_C | e5gasC1 | A: a/b three-layered sandwiches | X: Transmembrane heme-binding four-helical bundle | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ATP-synt_VA_C | ECOD (v294.1) |
| B | ATP-synt_VA_C | e5gasB1 | A: a/b three-layered sandwiches | X: Transmembrane heme-binding four-helical bundle | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ATP-synt_VA_C | ECOD (v294.1) |
| A | ATP-synt_VA_C | e5gasA1 | A: a/b three-layered sandwiches | X: Transmembrane heme-binding four-helical bundle | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ATP-synt_VA_C | ECOD (v294.1) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00137 | ATP synthase subunit C (ATP-synt_C) | ATP synthase subunit C | This domain is found in the subunit c of ATP synthases and similar sequences from all cellular organisms. It forms two alpha-helices [1-4]. | Domain | |
| PF01992 | ATP synthase (C/AC39) subunit (vATP-synt_AC39) | ATP synthase (C/AC39) subunit | - | Family | |
| PF01990 | ATP synthase (F/14-kDa) subunit (ATP-synt_F) | ATP synthase (F/14-kDa) subunit | - | Family | |
| PF01813 | ATP synthase subunit D (ATP-synt_D) | ATP synthase subunit D | - | Family | |
| PF01991 | ATP synthase (E/31 kDa) subunit (vATP-synt_E) | ATP synthase (E/31 kDa) subunit | - | Family | |
| PF00006 | ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab) | ATP synthase alpha/beta family, nucleotide-binding domain | This entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho. | Domain | |
| PF22919 | C-terminal domain of V and A type ATP synthase (ATP-synt_VA_C) | C-terminal domain of V and A type ATP synthase | This entry represents a small alpha helical domain found at the C-terminus of a variety of ATP synthases. | Domain | |
| PF02874 | ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N) | ATP synthase alpha/beta family, beta-barrel domain | This family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella. | Domain | |
| PF00006 | ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab) | ATP synthase alpha/beta family, nucleotide-binding domain | This entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho. | Domain | |
| PF22919 | C-terminal domain of V and A type ATP synthase (ATP-synt_VA_C) | C-terminal domain of V and A type ATP synthase | This entry represents a small alpha helical domain found at the C-terminus of a variety of ATP synthases. | Domain | |
| PF16886 | ATPsynthase alpha/beta subunit barrel-sandwich domain (ATP-synt_ab_Xtn) | ATPsynthase alpha/beta subunit barrel-sandwich domain | This barrel-sandwich domain is found in the alpha-beta catalytic subunit of VATA or V-type proton ATPase catalytic subunit at the N-terminal end. This domain has a circularly permuted topology compared to other barrel-sandwich domains. In VATA barrel ... | Domain | |
| PF02874 | ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N) | ATP synthase alpha/beta family, beta-barrel domain | This family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella. | Domain |














