Structure of the Argonaute protein from Methanocaldcoccus janaschii
External Resource: Annotation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
A | SCOP2 Family | N-terminal domain of argonaute | 8053648 | 4004602 | SCOP2 (2022-06-29) |
A | SCOP2 Family | PIWI domain | 8053651 | 4002242 | SCOP2 (2022-06-29) |
A | SCOP2 Family | PAZ domain | 8053649 | 4000853 | SCOP2 (2022-06-29) |
A | SCOP2 Family | Mid domain of argonaute | 8053650 | 4004605 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | RNA-binding domain RBD | 8053653 | 3000110 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Ribonuclease H-like | 8053656 | 3000143 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | PAZ domain | 8053654 | 3001750 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Mid domain of argonaute | 8053655 | 3002210 | SCOP2 (2022-06-29) |
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
A | PF22333 | e5g5sA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF22333 | ECOD (1.6) |
A | F_UNCLASSIFIED | e5g5sA2 | A: a+b two layers | X: Alpha-beta plaits | H: Argonaute, N-terminal domain (From Topology) | T: Argonaute, N-terminal domain | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF22138 | e5g5sA4 | A: a+b two layers | X: Alpha-beta plaits | H: Argonaute, N-terminal domain (From Topology) | T: Argonaute, N-terminal domain | F: PF22138 | ECOD (1.6) |
A | PF02171 | e5g5sA3 | A: a/b three-layered sandwiches | X: Middle domain in Argonaute homologs (From Topology) | H: Middle domain in Argonaute homologs (From Topology) | T: Middle domain in Argonaute homologs | F: PF02171 | ECOD (1.6) |
A | PF02171 | e5g5sA5 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF02171 | ECOD (1.6) |
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
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| ARGONAUTE | | | - |