5FQ3 | pdb_00005fq3

Crystal structure of the lipoprotein BT2262 from Bacteroides thetaiotaomicron

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Bact_surface_Ig-like	e5fq3A1	A: a/b three-layered sandwiches	X: jelly-roll	H: AOC barrel-like	T: AOC barrel-like	F: Bact_surface_Ig-like	ECOD (v294.1)
A	Glyco_hydro_18	e5fq3A2	A: a/b three-layered sandwiches	X: jelly-roll	H: AOC barrel-like	T: AOC barrel-like	F: Glyco_hydro_18	ECOD (v294.1)
B	Phage_int_SAM_6	e5fq3B1	A: a/b three-layered sandwiches	X: F-type ATP synthase subunit b	H: Bacterial cell wall synthesis membrane enzyme MraY-related	T: Bacterial cell wall synthesis membrane enzyme MraY-related	F: Phage_int_SAM_6	ECOD (v294.1)
C	Phage_int_SAM_6	e5fq3C1	A: a/b three-layered sandwiches	X: F-type ATP synthase subunit b	H: Bacterial cell wall synthesis membrane enzyme MraY-related	T: Bacterial cell wall synthesis membrane enzyme MraY-related	F: Phage_int_SAM_6	ECOD (v294.1)
D	Phage_int_SAM_6	e5fq3D1	A: a/b three-layered sandwiches	X: F-type ATP synthase subunit b	H: Bacterial cell wall synthesis membrane enzyme MraY-related	T: Bacterial cell wall synthesis membrane enzyme MraY-related	F: Phage_int_SAM_6	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF16404	BT_2262-like, C-terminal domain (BT_2262-like_C)	BT_2262-like, C-terminal domain	This domain found at the C-terminal end of proteins found in Bacteroidetes, including BT_2262 from Bacteroides thetaiotaomicron, a small outer membrane lipoprotein located on the periphery of the SusCD complex, which is essential for the import of ol ...	This domain found at the C-terminal end of proteins found in Bacteroidetes, including BT_2262 from Bacteroides thetaiotaomicron, a small outer membrane lipoprotein located on the periphery of the SusCD complex, which is essential for the import of oligosaccharides and for glycan degradation. This domain shows an eight-stranded beta-barrel with structural similarity to lipid binding domains. Its specific function remains unknown [1].	Domain
A, B, C, D	PF16403	Bacterial surface protein, Ig-like domain (Bact_surface_Ig-like)	Bacterial surface protein, Ig-like domain	This entry represents a bacterial immunoglobulin-like domain found in bacterial proteins, including Pesticidal crystal protein Cry22Aa from Bacillus thuringiensis, a protein with a toxic effect on several insect larvae and Chitinase 60 from Moritella ...	This entry represents a bacterial immunoglobulin-like domain found in bacterial proteins, including Pesticidal crystal protein Cry22Aa from Bacillus thuringiensis, a protein with a toxic effect on several insect larvae and Chitinase 60 from Moritella marina (Swiss:B1VBB0), responsible for degradation of krill chitin.	Domain

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR032179	Pesticidal crystal protein Cry22Aa, Ig-like domain	Domain
A, B, C, D	IPR032180	BT_2262-like, C-terminal domain	Domain
A, B, C, D	IPR013783	Immunoglobulin-like fold	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.