5FN1 | pdb_00005fn1

Electron cryo-microscopy of filamentous flexible virus PepMV (Pepino Mosaic Virus)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyPepMV Coat protein-like 8047613 4005718 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyPepMV Coat protein-like 8089900 3002401 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AFlexi_CPe5fn1A1 A: alpha complex topologyX: Rift Valley fever virus nucleocapsid protein-related (From Homology)H: Rift Valley fever virus nucleocapsid protein-relatedT: Papaya mosaic virus capsid proteinF: Flexi_CPECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00286Viral coat protein (Flexi_CP)Viral coat proteinFamily includes coat proteins from Potexviruses and carlaviruses. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
5'-R(*UP*UP*UP*UP*UP)-3'---
COAT PROTEIN -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR000052Potex/carlavirus coat proteinDomain