5F1I | pdb_00005f1i

MHC with 9-mer peptide


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
HSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8003766 3000071 SCOP2B (2022-06-29)
WSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8003766 3000071 SCOP2B (2022-06-29)
TSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8003766 3000071 SCOP2B (2022-06-29)
QSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8003766 3000071 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8003766 3000071 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8003766 3000071 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8003766 3000071 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8003766 3000071 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
HMMS1_Ne5f1iH1 A: a/b three-layered sandwichesX: beta-propeller-likeH: beta-propellerT: 7-bladedF: MMS1_NECOD (v294.1)
WMMS1_Ne5f1iW1 A: a/b three-layered sandwichesX: beta-propeller-likeH: beta-propellerT: 7-bladedF: MMS1_NECOD (v294.1)
TMMS1_Ne5f1iT1 A: a/b three-layered sandwichesX: beta-propeller-likeH: beta-propellerT: 7-bladedF: MMS1_NECOD (v294.1)
QMMS1_Ne5f1iQ1 A: a/b three-layered sandwichesX: beta-propeller-likeH: beta-propellerT: 7-bladedF: MMS1_NECOD (v294.1)
NMMS1_Ne5f1iN1 A: a/b three-layered sandwichesX: beta-propeller-likeH: beta-propellerT: 7-bladedF: MMS1_NECOD (v294.1)
KMMS1_Ne5f1iK1 A: a/b three-layered sandwichesX: beta-propeller-likeH: beta-propellerT: 7-bladedF: MMS1_NECOD (v294.1)
EMMS1_Ne5f1iE1 A: a/b three-layered sandwichesX: beta-propeller-likeH: beta-propellerT: 7-bladedF: MMS1_NECOD (v294.1)
BMMS1_Ne5f1iB1 A: a/b three-layered sandwichesX: beta-propeller-likeH: beta-propellerT: 7-bladedF: MMS1_NECOD (v294.1)
VMMS1_Ne5f1iV1 A: a/b three-layered sandwichesX: beta-propeller-likeH: beta-propellerT: 7-bladedF: MMS1_NECOD (v294.1)
SMMS1_Ne5f1iS1 A: a/b three-layered sandwichesX: beta-propeller-likeH: beta-propellerT: 7-bladedF: MMS1_NECOD (v294.1)
PMMS1_Ne5f1iP1 A: a/b three-layered sandwichesX: beta-propeller-likeH: beta-propellerT: 7-bladedF: MMS1_NECOD (v294.1)
MMMS1_Ne5f1iM1 A: a/b three-layered sandwichesX: beta-propeller-likeH: beta-propellerT: 7-bladedF: MMS1_NECOD (v294.1)
JMMS1_Ne5f1iJ1 A: a/b three-layered sandwichesX: beta-propeller-likeH: beta-propellerT: 7-bladedF: MMS1_NECOD (v294.1)
GMMS1_Ne5f1iG1 A: a/b three-layered sandwichesX: beta-propeller-likeH: beta-propellerT: 7-bladedF: MMS1_NECOD (v294.1)
DMMS1_Ne5f1iD1 A: a/b three-layered sandwichesX: beta-propeller-likeH: beta-propellerT: 7-bladedF: MMS1_NECOD (v294.1)
AMMS1_Ne5f1iA1 A: a/b three-layered sandwichesX: beta-propeller-likeH: beta-propellerT: 7-bladedF: MMS1_NECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
H2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
W2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
T2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
Q2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
N2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
K2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
E2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
B2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
V3.30.500.10 Alpha Beta 2-Layer Sandwich Murine Class I Major Histocompatibility Complex, H2-DB Chain A, domain 1CATH (4.3.0)
V2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
S3.30.500.10 Alpha Beta 2-Layer Sandwich Murine Class I Major Histocompatibility Complex, H2-DB Chain A, domain 1CATH (4.3.0)
S2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
P3.30.500.10 Alpha Beta 2-Layer Sandwich Murine Class I Major Histocompatibility Complex, H2-DB Chain A, domain 1CATH (4.3.0)
P2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
M3.30.500.10 Alpha Beta 2-Layer Sandwich Murine Class I Major Histocompatibility Complex, H2-DB Chain A, domain 1CATH (4.3.0)
M2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
J3.30.500.10 Alpha Beta 2-Layer Sandwich Murine Class I Major Histocompatibility Complex, H2-DB Chain A, domain 1CATH (4.3.0)
J2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
G3.30.500.10 Alpha Beta 2-Layer Sandwich Murine Class I Major Histocompatibility Complex, H2-DB Chain A, domain 1CATH (4.3.0)
G2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
D3.30.500.10 Alpha Beta 2-Layer Sandwich Murine Class I Major Histocompatibility Complex, H2-DB Chain A, domain 1CATH (4.3.0)
D2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
A3.30.500.10 Alpha Beta 2-Layer Sandwich Murine Class I Major Histocompatibility Complex, H2-DB Chain A, domain 1CATH (4.3.0)
A2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
B, E, H, K, N
MH1 HLA-A*0205 B2M Homo sapiens (human) B2M*01, B2M*02 C-LIKE-DOMAIN C-LIKE MH MH1-ALPHA_B2M IMGT (202612-0)
A, D, G, J, M
MH1 HLA-A*0205 I-ALPHA Homo sapiens (human) HLA-A*0205, HLA-A*0206, HLA-A*0210, HLA-A*0214, HLA-A*0251, HLA-A*0257, HLA-A*0279 G-DOMAIN G-ALPHA1 MH MH1-ALPHA_B2M IMGT (202612-0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B, E, H, K, N
PF07654Immunoglobulin C1-set domain (C1-set)Immunoglobulin C1-set domainDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C, F, I, L, O
9-mer peptide---
B, E, H, K, N
Beta2M
A, D, G, J, M
MHC class I DLA-88-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B, E, H, K, N
IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
B, E, H, K, N
IPR003006Immunoglobulin/major histocompatibility complex, conserved siteConserved Site
B, E, H, K, N
IPR013783Immunoglobulin-like foldHomologous Superfamily
B, E, H, K, N
IPR007110Immunoglobulin-like domainDomain
B, E, H, K, N
IPR050160Major Histocompatibility Complex/ImmunoglobulinFamily
B, E, H, K, N
IPR003597Immunoglobulin C1-setDomain
B, E, H, K, N
IPR015707Beta-2-MicroglobulinFamily
A, D, G, J, M
IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
A, D, G, J, M
IPR050208Antigen-presenting and immune regulatory MHC class I-relatedFamily
A, D, G, J, M
IPR037055MHC class I-like antigen recognition-like superfamilyHomologous Superfamily
A, D, G, J, M
IPR003597Immunoglobulin C1-setDomain
A, D, G, J, M
IPR013783Immunoglobulin-like foldHomologous Superfamily
A, D, G, J, M
IPR011161MHC class I-like antigen recognition-likeDomain
A, D, G, J, M
IPR011162MHC classes I/II-like antigen recognition proteinHomologous Superfamily
A, D, G, J, M
IPR007110Immunoglobulin-like domainDomain
A, D, G, J, M
IPR001039MHC class I alpha chain, alpha1 alpha2 domainsDomain
A, D, G, J, M
IPR003006Immunoglobulin/major histocompatibility complex, conserved siteConserved Site