5E2X | pdb_00005e2x

The crystal structure of the C-terminal domain of Ebola (Tai Forest) nucleoprotein

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d5e2xa1	Alpha and beta proteins (a+b)	Ebola nucleoprotein C-terminal domain-like	Ebola nucleoprotein C-terminal domain-like	Ebola nucleoprotein C-terminal domain-like	Ebola nucleoprotein	(Tai Forest ebolavirus ) [TaxId: 186541 ],	SCOPe (2.08)
A	d5e2xa2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Tai Forest ebolavirus ) [TaxId: 186541 ],	SCOPe (2.08)
B	d5e2xb1	Alpha and beta proteins (a+b)	Ebola nucleoprotein C-terminal domain-like	Ebola nucleoprotein C-terminal domain-like	Ebola nucleoprotein C-terminal domain-like	Ebola nucleoprotein	(Tai Forest ebolavirus ) [TaxId: 186541 ],	SCOPe (2.08)
B	d5e2xb2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Tai Forest ebolavirus ) [TaxId: 186541 ],	SCOPe (2.08)
C	d5e2xc1	Alpha and beta proteins (a+b)	Ebola nucleoprotein C-terminal domain-like	Ebola nucleoprotein C-terminal domain-like	Ebola nucleoprotein C-terminal domain-like	Ebola nucleoprotein	(Tai Forest ebolavirus ) [TaxId: 186541 ],	SCOPe (2.08)
C	d5e2xc2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Tai Forest ebolavirus ) [TaxId: 186541 ],	SCOPe (2.08)
D	d5e2xd1	Alpha and beta proteins (a+b)	Ebola nucleoprotein C-terminal domain-like	Ebola nucleoprotein C-terminal domain-like	Ebola nucleoprotein C-terminal domain-like	Ebola nucleoprotein	(Tai Forest ebolavirus ) [TaxId: 186541 ],	SCOPe (2.08)
D	d5e2xd2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Tai Forest ebolavirus ) [TaxId: 186541 ],	SCOPe (2.08)
E	d5e2xe_	Alpha and beta proteins (a+b)	Ebola nucleoprotein C-terminal domain-like	Ebola nucleoprotein C-terminal domain-like	Ebola nucleoprotein C-terminal domain-like	Ebola nucleoprotein	(Tai Forest ebolavirus ) [TaxId: 186541 ],	SCOPe (2.08)
F	d5e2xf_	Alpha and beta proteins (a+b)	Ebola nucleoprotein C-terminal domain-like	Ebola nucleoprotein C-terminal domain-like	Ebola nucleoprotein C-terminal domain-like	Ebola nucleoprotein	(Tai Forest ebolavirus ) [TaxId: 186541 ],	SCOPe (2.08)
G	d5e2xg1	Alpha and beta proteins (a+b)	Ebola nucleoprotein C-terminal domain-like	Ebola nucleoprotein C-terminal domain-like	Ebola nucleoprotein C-terminal domain-like	Ebola nucleoprotein	(Tai Forest ebolavirus ) [TaxId: 186541 ],	SCOPe (2.08)
G	d5e2xg2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Tai Forest ebolavirus ) [TaxId: 186541 ],	SCOPe (2.08)
H	d5e2xh1	Alpha and beta proteins (a+b)	Ebola nucleoprotein C-terminal domain-like	Ebola nucleoprotein C-terminal domain-like	Ebola nucleoprotein C-terminal domain-like	Ebola nucleoprotein	(Tai Forest ebolavirus ) [TaxId: 186541 ],	SCOPe (2.08)
H	d5e2xh2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Tai Forest ebolavirus ) [TaxId: 186541 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Ribosomal_L36	e5e2xA1	A: alpha arrays	X: C-terminal additional helical subdomain in reovirus polymerase lambda3	H: C-terminal additional helical subdomain in reovirus polymerase lambda3	T: C-terminal additional helical subdomain in reovirus polymerase lambda3	F: Ribosomal_L36	ECOD (v295.2)
B	Ribosomal_L36	e5e2xB1	A: alpha arrays	X: C-terminal additional helical subdomain in reovirus polymerase lambda3	H: C-terminal additional helical subdomain in reovirus polymerase lambda3	T: C-terminal additional helical subdomain in reovirus polymerase lambda3	F: Ribosomal_L36	ECOD (v295.2)
C	Ribosomal_L36	e5e2xC1	A: alpha arrays	X: C-terminal additional helical subdomain in reovirus polymerase lambda3	H: C-terminal additional helical subdomain in reovirus polymerase lambda3	T: C-terminal additional helical subdomain in reovirus polymerase lambda3	F: Ribosomal_L36	ECOD (v295.2)
D	Ribosomal_L36	e5e2xD1	A: alpha arrays	X: C-terminal additional helical subdomain in reovirus polymerase lambda3	H: C-terminal additional helical subdomain in reovirus polymerase lambda3	T: C-terminal additional helical subdomain in reovirus polymerase lambda3	F: Ribosomal_L36	ECOD (v295.2)
E	Ribosomal_L36	e5e2xE1	A: alpha arrays	X: C-terminal additional helical subdomain in reovirus polymerase lambda3	H: C-terminal additional helical subdomain in reovirus polymerase lambda3	T: C-terminal additional helical subdomain in reovirus polymerase lambda3	F: Ribosomal_L36	ECOD (v295.2)
F	Ribosomal_L36	e5e2xF1	A: alpha arrays	X: C-terminal additional helical subdomain in reovirus polymerase lambda3	H: C-terminal additional helical subdomain in reovirus polymerase lambda3	T: C-terminal additional helical subdomain in reovirus polymerase lambda3	F: Ribosomal_L36	ECOD (v295.2)
G	Ribosomal_L36	e5e2xG1	A: alpha arrays	X: C-terminal additional helical subdomain in reovirus polymerase lambda3	H: C-terminal additional helical subdomain in reovirus polymerase lambda3	T: C-terminal additional helical subdomain in reovirus polymerase lambda3	F: Ribosomal_L36	ECOD (v295.2)
H	Ribosomal_L36	e5e2xH1	A: alpha arrays	X: C-terminal additional helical subdomain in reovirus polymerase lambda3	H: C-terminal additional helical subdomain in reovirus polymerase lambda3	T: C-terminal additional helical subdomain in reovirus polymerase lambda3	F: Ribosomal_L36	ECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H	NP	RNA binding binding nucleic acid binding	virion assembly viral RNA genome packaging viral process viral life cycle viral genome packaging	protein-containing complex ribonucleoprotein complex viral nucleocapsid viral capsid virion component host cellular component host intracellular part cellular anatomical structure host cell cytoplasm host cell part host intracellular region other organism part helical viral capsid

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR008609	Ebola nucleoprotein	Family
A, B, C, D, E A, B, C, D, E, F, G, H	IPR015970	P40 nucleoprotein, subdomain 2, Borna disease virus	Homologous Superfamily

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.