Crystal structure of the Nup98 C-terminal domain bound to nanobody TP377
External Resource: Annotation
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
B | SCOP2 Family | Nup98 autoproteolytic domain-like | 8097989 | 4007737 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | ZU5 domain-like | 8097990 | 3002026 | SCOP2 (2022-06-29) |
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
A | V-set_8 | e5e0qA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_8 | ECOD (1.6) |
B | Nucleoporin2 | e5e0qB1 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: ZU5/Nup98-C/GAIN-B autoproteolytic domain-related (From Topology) | T: ZU5/Nup98-C/GAIN-B autoproteolytic domain-related | F: Nucleoporin2 | ECOD (1.6) |
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
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| Nanobody TP377, anti-Nup98 | VH | Vicugna pacos (alpaca) | IGHV3S72*01, IGHJ4*01 | V-DOMAIN VH | IG | VH | IMGT (202436-0) |
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
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| Heavy Chain | IGHV1 | - | nuclear pore complex protein nup98-nup96 | SAbDab (2024-09-13) |
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
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| Anti-Nup98 Nanobody TP377 | - | - | - |
| Nuclear pore complex protein Nup98-Nup96 | | | |