5DYM | pdb_00005dym

Crystal structure of a PadR family transcription regulator from hypervirulent Clostridium difficile R20291 - CdPadR_0991 to 1.89 Angstrom resolution

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad5dyma_ All alpha proteins DNA/RNA-binding 3-helical bundle 'Winged helix' DNA-binding domain automated matches automated matches (Clostridioides difficile R20291 ) [TaxId: 645463 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APPP2R1A-like_HEAT, VPS15-like_hele5dymA1 A: a/b three-layered sandwichesX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PPP2R1A-like_HEAT, VPS15-like_helECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.10.10.10 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domainCATH (4.3.0)