5DOR
P2 Integrase catalytic domain in space group P21
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
D | d5dord_ | Alpha and beta proteins (a+b) | DNA breaking-rejoining enzymes | DNA breaking-rejoining enzymes | Lambda integrase-like, catalytic core | Integrase (Int) | (Peduovirus P2 ) [TaxId: 10679 ], | SCOPe (2.08) |
A | d5dora_ | Alpha and beta proteins (a+b) | DNA breaking-rejoining enzymes | DNA breaking-rejoining enzymes | Lambda integrase-like, catalytic core | Integrase (Int) | (Peduovirus P2 ) [TaxId: 10679 ], | SCOPe (2.08) |
B | d5dorb_ | Alpha and beta proteins (a+b) | DNA breaking-rejoining enzymes | DNA breaking-rejoining enzymes | Lambda integrase-like, catalytic core | Integrase (Int) | (Peduovirus P2 ) [TaxId: 10679 ], | SCOPe (2.08) |
C | d5dorc_ | Alpha and beta proteins (a+b) | DNA breaking-rejoining enzymes | DNA breaking-rejoining enzymes | Lambda integrase-like, catalytic core | Integrase (Int) | (Peduovirus P2 ) [TaxId: 10679 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
D | SCOP2B Superfamily | DNA breaking-rejoining enzymes | 8078465 | 3001127 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | DNA breaking-rejoining enzymes | 8078465 | 3001127 | SCOP2B (2022-06-29) |
B | SCOP2 Family | Lambda integrase-like catalytic core | 8078464 | 4002347 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | DNA breaking-rejoining enzymes | 8078465 | 3001127 | SCOP2 (2022-06-29) |
C | SCOP2B Superfamily | DNA breaking-rejoining enzymes | 8078465 | 3001127 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
D | PF00589 | e5dorD1 | A: alpha arrays | X: HTH | H: HTH | T: DNA breaking-rejoining enzymes | F: PF00589 | ECOD (1.6) |
A | PF00589 | e5dorA1 | A: alpha arrays | X: HTH | H: HTH | T: DNA breaking-rejoining enzymes | F: PF00589 | ECOD (1.6) |
B | PF00589 | e5dorB2 | A: alpha arrays | X: HTH | H: HTH | T: DNA breaking-rejoining enzymes | F: PF00589 | ECOD (1.6) |
C | PF00589 | e5dorC1 | A: alpha arrays | X: HTH | H: HTH | T: DNA breaking-rejoining enzymes | F: PF00589 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
D | 1.10.443.10 | Mainly Alpha | Orthogonal Bundle | hpI Integrase | Chain A | CATH (4.3.0) |
A | 1.10.443.10 | Mainly Alpha | Orthogonal Bundle | hpI Integrase | Chain A | CATH (4.3.0) |
B | 1.10.443.10 | Mainly Alpha | Orthogonal Bundle | hpI Integrase | Chain A | CATH (4.3.0) |
C | 1.10.443.10 | Mainly Alpha | Orthogonal Bundle | hpI Integrase | Chain A | CATH (4.3.0) |