5D80 | pdb_00005d80

Crystal Structure of Yeast V1-ATPase in the Autoinhibited Form

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: mpstruc

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
G [auth H]	SCOP2B Superfamily	ARM repeat-like	8033221	3000116	SCOP2B (2022-06-29)
T [auth h]	SCOP2B Superfamily	ARM repeat-like	8033221	3000116	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	C2	e5d80B1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-propeller	T: 9-bladed	F: C2	ECOD (v294.1)
N [auth a]	C2	e5d80a1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-propeller	T: 9-bladed	F: C2	ECOD (v294.1)
O [auth b]	C2	e5d80b1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-propeller	T: 9-bladed	F: C2	ECOD (v294.1)
P [auth c]	C2	e5d80c1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-propeller	T: 9-bladed	F: C2	ECOD (v294.1)
C	C2	e5d80C1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-propeller	T: 9-bladed	F: C2	ECOD (v294.1)
A	C2	e5d80A1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-propeller	T: 9-bladed	F: C2	ECOD (v294.1)
D	C2	e5d80D1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-propeller	T: 9-bladed	F: C2	ECOD (v294.1)
R [auth e]	C2	e5d80e1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-propeller	T: 9-bladed	F: C2	ECOD (v294.1)
S [auth f]	C2	e5d80f1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-propeller	T: 9-bladed	F: C2	ECOD (v294.1)
Q [auth d]	C2	e5d80d1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-propeller	T: 9-bladed	F: C2	ECOD (v294.1)
F	C2	e5d80F1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-propeller	T: 9-bladed	F: C2	ECOD (v294.1)
E	C2	e5d80E1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-propeller	T: 9-bladed	F: C2	ECOD (v294.1)
G [auth H]	C2	e5d80H1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-propeller	T: 9-bladed	F: C2	ECOD (v294.1)
T [auth h]	C2	e5d80h1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-propeller	T: 9-bladed	F: C2	ECOD (v294.1)
V [auth i]	C2	e5d80i1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-propeller	T: 9-bladed	F: C2	ECOD (v294.1)
W [auth k]	C2	e5d80k1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-propeller	T: 9-bladed	F: C2	ECOD (v294.1)
Y [auth m]	C2	e5d80m1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-propeller	T: 9-bladed	F: C2	ECOD (v294.1)
L [auth M]	C2	e5d80M1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-propeller	T: 9-bladed	F: C2	ECOD (v294.1)
J [auth K]	C2	e5d80K1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-propeller	T: 9-bladed	F: C2	ECOD (v294.1)
I	C2	e5d80I1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-propeller	T: 9-bladed	F: C2	ECOD (v294.1)
CA [auth o]	C2	e5d80o1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-propeller	T: 9-bladed	F: C2	ECOD (v294.1)
DA [auth O]	C2	e5d80O1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-propeller	T: 9-bladed	F: C2	ECOD (v294.1)
AA [auth G]	C2	e5d80G1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-propeller	T: 9-bladed	F: C2	ECOD (v294.1)
BA [auth g]	C2	e5d80g1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-propeller	T: 9-bladed	F: C2	ECOD (v294.1)
H [auth J]	C2	e5d80J1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-propeller	T: 9-bladed	F: C2	ECOD (v294.1)
M [auth N]	C2	e5d80N1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-propeller	T: 9-bladed	F: C2	ECOD (v294.1)
U [auth j]	C2	e5d80j1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-propeller	T: 9-bladed	F: C2	ECOD (v294.1)
Z [auth n]	C2	e5d80n1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-propeller	T: 9-bladed	F: C2	ECOD (v294.1)
X [auth l]	C2	e5d80l1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-propeller	T: 9-bladed	F: C2	ECOD (v294.1)
K [auth L]	C2	e5d80L1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-propeller	T: 9-bladed	F: C2	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, N [auth a], O [auth b], A, B, C, N [auth a], O [auth b], P [auth c]	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab)	ATP synthase alpha/beta family, nucleotide-binding domain	This entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho.	Domain
A, B, C, N [auth a], O [auth b], A, B, C, N [auth a], O [auth b], P [auth c]	PF22919	C-terminal domain of V and A type ATP synthase (ATP-synt_VA_C)	C-terminal domain of V and A type ATP synthase	This entry represents a small alpha helical domain found at the C-terminus of a variety of ATP synthases.	Domain
A, B, C, N [auth a], O [auth b], A, B, C, N [auth a], O [auth b], P [auth c]	PF16886	ATPsynthase alpha/beta subunit barrel-sandwich domain (ATP-synt_ab_Xtn)	ATPsynthase alpha/beta subunit barrel-sandwich domain	This barrel-sandwich domain is found in the alpha-beta catalytic subunit of VATA or V-type proton ATPase catalytic subunit at the N-terminal end. This domain has a circularly permuted topology compared to other barrel-sandwich domains. In VATA barrel ...	This barrel-sandwich domain is found in the alpha-beta catalytic subunit of VATA or V-type proton ATPase catalytic subunit at the N-terminal end. This domain has a circularly permuted topology compared to other barrel-sandwich domains. In VATA barrel-sandwich domain the C-terminal strand is circularly permuted and occupies the spatial position of the N-terminal strand in other hybrid domains.	Domain
A, B, C, N [auth a], O [auth b], A, B, C, N [auth a], O [auth b], P [auth c]	PF02874	ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N)	ATP synthase alpha/beta family, beta-barrel domain	This family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella.	Domain
D, E, F, Q [auth d], R [auth e], D, E, F, Q [auth d], R [auth e], S [auth f]	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab)	ATP synthase alpha/beta family, nucleotide-binding domain	This entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho.	Domain
D, E, F, Q [auth d], R [auth e], D, E, F, Q [auth d], R [auth e], S [auth f]	PF22919	C-terminal domain of V and A type ATP synthase (ATP-synt_VA_C)	C-terminal domain of V and A type ATP synthase	This entry represents a small alpha helical domain found at the C-terminus of a variety of ATP synthases.	Domain
D, E, F, Q [auth d], R [auth e], D, E, F, Q [auth d], R [auth e], S [auth f]	PF02874	ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N)	ATP synthase alpha/beta family, beta-barrel domain	This family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella.	Domain
G [auth H], T [auth h]	PF11698	V-ATPase subunit H (V-ATPase_H_C)	V-ATPase subunit H	-	Repeat
G [auth H], T [auth h]	PF03224	V-ATPase subunit H (V-ATPase_H_N)	V-ATPase subunit H	-	Repeat
I, J [auth K], L [auth M], V [auth i], W [auth k], I, J [auth K], L [auth M], V [auth i], W [auth k], Y [auth m]	PF01991	ATP synthase (E/31 kDa) subunit (vATP-synt_E)	ATP synthase (E/31 kDa) subunit	-	Family
CA [auth o], DA [auth O]	PF01990	ATP synthase (F/14-kDa) subunit (ATP-synt_F)	ATP synthase (F/14-kDa) subunit	-	Family
AA [auth G], BA [auth g]	PF01813	ATP synthase subunit D (ATP-synt_D)	ATP synthase subunit D	-	Family
H [auth J], K [auth L], M [auth N], U [auth j], X [auth l], H [auth J], K [auth L], M [auth N], U [auth j], X [auth l], Z [auth n]	PF03179	Vacuolar (H+)-ATPase G subunit (V-ATPase_G)	Vacuolar (H+)-ATPase G subunit	-	Coiled-coil

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, N [auth a], O [auth b], A, B, C, N [auth a], O [auth b], P [auth c]	V-type proton ATPase catalytic subunit A	monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity ATPase-coupled transmembrane transporter activity proton-transporting ATPase activity, rotational mechanism ATPase-coupled monoatomic cation transmembrane transporter activity ATP-dependent activity active monoatomic ion transmembrane transporter activity ATPase-coupled ion transmembrane transporter activity active transmembrane transporter activity ATPase activity, coupled to transmembrane movement of ions, rotational mechanism monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity ATPase-coupled transmembrane transporter activity proton-transporting ATPase activity, rotational mechanism ATPase-coupled monoatomic cation transmembrane transporter activity ATP-dependent activity active monoatomic ion transmembrane transporter activity ATPase-coupled ion transmembrane transporter activity active transmembrane transporter activity ATPase activity, coupled to transmembrane movement of ions, rotational mechanism monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity hydrolase activity catalytic activity binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding DNA binding nucleic acid binding RNA binding mRNA binding endonuclease activity nuclease activity catalytic activity, acting on a nucleic acid	monoatomic cation transmembrane transport transmembrane transport localization transport proton transmembrane transport monoatomic ion transmembrane transport monoatomic ion transport cellular process monoatomic cation transport establishment of localization nucleoside phosphate metabolic process ribose phosphate metabolic process purine nucleoside triphosphate metabolic process ATP metabolic process monoatomic cation transmembrane transport transmembrane transport localization transport proton transmembrane transport monoatomic ion transmembrane transport monoatomic ion transport cellular process monoatomic cation transport establishment of localization nucleoside phosphate metabolic process ribose phosphate metabolic process purine nucleoside triphosphate metabolic process ATP metabolic process carbohydrate derivative metabolic process primary metabolic process nucleotide metabolic process purine-containing compound metabolic process nucleobase-containing compound metabolic process purine nucleotide metabolic process ribonucleotide metabolic process organophosphate metabolic process nucleobase-containing small molecule metabolic process purine ribonucleoside triphosphate metabolic process phosphate-containing compound metabolic process metabolic process small molecule metabolic process nucleoside triphosphate metabolic process purine ribonucleotide metabolic process phosphorus metabolic process DNA recombination DNA metabolic process macromolecule metabolic process nucleic acid metabolic process intron homing homeostatic process biological regulation intracellular pH reduction regulation of intracellular pH vesicle organization cellular component organization organelle organization cellular homeostasis chemical homeostasis intracellular monoatomic cation homeostasis regulation of pH monoatomic ion homeostasis endosome organization intracellular chemical homeostasis cellular component organization or biogenesis regulation of biological quality endosomal lumen acidification monoatomic cation homeostasis endomembrane system organization intracellular monoatomic ion homeostasis intein-mediated protein splicing gene expression macromolecule biosynthetic process protein maturation biosynthetic process proteolysis protein processing protein metabolic process protein splicing Golgi lumen acidification vacuolar acidification	ATPase dependent transmembrane transport complex membrane-bounded organelle protein-containing complex ATPase complex intracellular anatomical structure membrane protein complex proton-transporting V-type ATPase complex proton-transporting V-type ATPase, V1 domain transporter complex vacuolar proton-transporting V-type ATPase, V1 domain intracellular organelle cellular anatomical structure bounding membrane of organelle proton-transporting two-sector ATPase complex ATPase dependent transmembrane transport complex membrane-bounded organelle protein-containing complex ATPase complex intracellular anatomical structure membrane protein complex proton-transporting V-type ATPase complex proton-transporting V-type ATPase, V1 domain transporter complex vacuolar proton-transporting V-type ATPase, V1 domain intracellular organelle cellular anatomical structure bounding membrane of organelle proton-transporting two-sector ATPase complex proton-transporting two-sector ATPase complex, catalytic domain vacuolar membrane catalytic complex membrane vacuole intracellular membrane-bounded organelle vacuolar proton-transporting V-type ATPase complex cation-transporting ATPase complex transmembrane transporter complex organelle cytoplasm organelle membrane storage vacuole lytic vacuole fungal-type vacuole lytic vacuole membrane fungal-type vacuole membrane Golgi membrane Golgi apparatus endomembrane system
D, E, F, Q [auth d], R [auth e], D, E, F, Q [auth d], R [auth e], S [auth f]	V-type proton ATPase subunit B	monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity ATPase-coupled transmembrane transporter activity proton-transporting ATPase activity, rotational mechanism ATPase-coupled monoatomic cation transmembrane transporter activity ATP-dependent activity active monoatomic ion transmembrane transporter activity ATPase-coupled ion transmembrane transporter activity active transmembrane transporter activity ATPase activity, coupled to transmembrane movement of ions, rotational mechanism monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity ATPase-coupled transmembrane transporter activity proton-transporting ATPase activity, rotational mechanism ATPase-coupled monoatomic cation transmembrane transporter activity ATP-dependent activity active monoatomic ion transmembrane transporter activity ATPase-coupled ion transmembrane transporter activity active transmembrane transporter activity ATPase activity, coupled to transmembrane movement of ions, rotational mechanism monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding	monoatomic cation transmembrane transport transmembrane transport localization transport proton transmembrane transport monoatomic ion transmembrane transport monoatomic ion transport cellular process monoatomic cation transport establishment of localization nucleoside phosphate metabolic process ribose phosphate metabolic process purine nucleoside triphosphate metabolic process ATP metabolic process monoatomic cation transmembrane transport transmembrane transport localization transport proton transmembrane transport monoatomic ion transmembrane transport monoatomic ion transport cellular process monoatomic cation transport establishment of localization nucleoside phosphate metabolic process ribose phosphate metabolic process purine nucleoside triphosphate metabolic process ATP metabolic process carbohydrate derivative metabolic process primary metabolic process nucleotide metabolic process purine-containing compound metabolic process nucleobase-containing compound metabolic process purine nucleotide metabolic process ribonucleotide metabolic process organophosphate metabolic process nucleobase-containing small molecule metabolic process purine ribonucleoside triphosphate metabolic process phosphate-containing compound metabolic process metabolic process small molecule metabolic process nucleoside triphosphate metabolic process purine ribonucleotide metabolic process phosphorus metabolic process homeostatic process biological regulation intracellular pH reduction regulation of intracellular pH vesicle organization cellular component organization organelle organization cellular homeostasis chemical homeostasis intracellular monoatomic cation homeostasis regulation of pH monoatomic ion homeostasis endosome organization intracellular chemical homeostasis cellular component organization or biogenesis regulation of biological quality endosomal lumen acidification monoatomic cation homeostasis endomembrane system organization intracellular monoatomic ion homeostasis inorganic ion homeostasis intracellular calcium ion homeostasis calcium ion homeostasis autophagy of peroxisome catabolic process macroautophagy pexophagy autophagy process utilizing autophagic mechanism cellular component biogenesis cellular component assembly organelle assembly membraneless organelle assembly proteasome storage granule assembly Golgi lumen acidification vacuolar acidification	organelle membrane contact site vacuole-mitochondrion membrane contact site cellular anatomical structure organelle intracellular anatomical structure cytoplasmic ribonucleoprotein granule intracellular membraneless organelle ribonucleoprotein granule intracellular organelle membraneless organelle cytoplasm supramolecular complex cytoplasmic stress granule ATPase dependent transmembrane transport complex organelle membrane contact site vacuole-mitochondrion membrane contact site cellular anatomical structure organelle intracellular anatomical structure cytoplasmic ribonucleoprotein granule intracellular membraneless organelle ribonucleoprotein granule intracellular organelle membraneless organelle cytoplasm supramolecular complex cytoplasmic stress granule ATPase dependent transmembrane transport complex membrane-bounded organelle protein-containing complex ATPase complex membrane protein complex proton-transporting V-type ATPase complex proton-transporting V-type ATPase, V1 domain transporter complex vacuolar proton-transporting V-type ATPase, V1 domain bounding membrane of organelle proton-transporting two-sector ATPase complex proton-transporting two-sector ATPase complex, catalytic domain vacuolar membrane catalytic complex membrane vacuole intracellular membrane-bounded organelle vacuolar proton-transporting V-type ATPase complex cation-transporting ATPase complex transmembrane transporter complex organelle membrane membrane microdomain membrane raft storage vacuole lytic vacuole fungal-type vacuole lytic vacuole membrane fungal-type vacuole membrane Golgi membrane Golgi apparatus endomembrane system
G [auth H], T [auth h]	V-type proton ATPase subunit H	monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity ATPase-coupled transmembrane transporter activity proton-transporting ATPase activity, rotational mechanism ATPase-coupled monoatomic cation transmembrane transporter activity ATP-dependent activity active monoatomic ion transmembrane transporter activity ATPase-coupled ion transmembrane transporter activity active transmembrane transporter activity ATPase activity, coupled to transmembrane movement of ions, rotational mechanism monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity	monoatomic cation transmembrane transport transmembrane transport localization transport proton transmembrane transport monoatomic ion transmembrane transport monoatomic ion transport cellular process monoatomic cation transport establishment of localization homeostatic process biological regulation intracellular pH reduction Golgi lumen acidification monoatomic cation transmembrane transport transmembrane transport localization transport proton transmembrane transport monoatomic ion transmembrane transport monoatomic ion transport cellular process monoatomic cation transport establishment of localization homeostatic process biological regulation intracellular pH reduction Golgi lumen acidification regulation of intracellular pH cellular homeostasis chemical homeostasis intracellular monoatomic cation homeostasis regulation of pH monoatomic ion homeostasis intracellular chemical homeostasis regulation of biological quality monoatomic cation homeostasis intracellular monoatomic ion homeostasis vesicle organization cellular component organization organelle organization endosome organization cellular component organization or biogenesis endosomal lumen acidification endomembrane system organization vacuolar acidification	vacuolar membrane membrane-bounded organelle storage vacuole intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle vacuolar membrane membrane-bounded organelle storage vacuole intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle cytoplasm organelle membrane fungal-type vacuole membrane ATPase dependent transmembrane transport complex protein-containing complex ATPase complex membrane protein complex proton-transporting V-type ATPase complex proton-transporting V-type ATPase, V1 domain transporter complex vacuolar proton-transporting V-type ATPase, V1 domain proton-transporting two-sector ATPase complex proton-transporting two-sector ATPase complex, catalytic domain catalytic complex vacuolar proton-transporting V-type ATPase complex cation-transporting ATPase complex transmembrane transporter complex Golgi membrane Golgi apparatus endomembrane system
I, J [auth K], L [auth M], V [auth i], W [auth k], I, J [auth K], L [auth M], V [auth i], W [auth k], Y [auth m]	V-type proton ATPase subunit E	monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity ATPase-coupled transmembrane transporter activity proton-transporting ATPase activity, rotational mechanism ATPase-coupled monoatomic cation transmembrane transporter activity ATP-dependent activity active monoatomic ion transmembrane transporter activity ATPase-coupled ion transmembrane transporter activity active transmembrane transporter activity ATPase activity, coupled to transmembrane movement of ions, rotational mechanism monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity	monoatomic cation transmembrane transport transmembrane transport localization transport proton transmembrane transport monoatomic ion transmembrane transport monoatomic ion transport cellular process monoatomic cation transport establishment of localization homeostatic process biological regulation intracellular pH reduction Golgi lumen acidification monoatomic cation transmembrane transport transmembrane transport localization transport proton transmembrane transport monoatomic ion transmembrane transport monoatomic ion transport cellular process monoatomic cation transport establishment of localization homeostatic process biological regulation intracellular pH reduction Golgi lumen acidification regulation of intracellular pH cellular homeostasis chemical homeostasis intracellular monoatomic cation homeostasis regulation of pH monoatomic ion homeostasis intracellular chemical homeostasis regulation of biological quality monoatomic cation homeostasis intracellular monoatomic ion homeostasis vesicle organization cellular component organization organelle organization endosome organization cellular component organization or biogenesis endosomal lumen acidification endomembrane system organization vacuolar acidification	vacuolar membrane membrane-bounded organelle storage vacuole intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle vacuolar membrane membrane-bounded organelle storage vacuole intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle cytoplasm organelle membrane fungal-type vacuole membrane ATPase dependent transmembrane transport complex protein-containing complex ATPase complex membrane protein complex proton-transporting V-type ATPase complex proton-transporting V-type ATPase, V1 domain transporter complex vacuolar proton-transporting V-type ATPase, V1 domain proton-transporting two-sector ATPase complex proton-transporting two-sector ATPase complex, catalytic domain catalytic complex vacuolar proton-transporting V-type ATPase complex cation-transporting ATPase complex transmembrane transporter complex Golgi membrane Golgi apparatus endomembrane system membrane microdomain membrane raft
CA [auth o], DA [auth O]	V-type proton ATPase subunit F	monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity ATPase-coupled transmembrane transporter activity proton-transporting ATPase activity, rotational mechanism ATPase-coupled monoatomic cation transmembrane transporter activity ATP-dependent activity active monoatomic ion transmembrane transporter activity ATPase-coupled ion transmembrane transporter activity active transmembrane transporter activity ATPase activity, coupled to transmembrane movement of ions, rotational mechanism monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity	monoatomic cation transmembrane transport transmembrane transport localization transport proton transmembrane transport monoatomic ion transmembrane transport monoatomic ion transport cellular process monoatomic cation transport establishment of localization homeostatic process biological regulation intracellular pH reduction Golgi lumen acidification monoatomic cation transmembrane transport transmembrane transport localization transport proton transmembrane transport monoatomic ion transmembrane transport monoatomic ion transport cellular process monoatomic cation transport establishment of localization homeostatic process biological regulation intracellular pH reduction Golgi lumen acidification regulation of intracellular pH cellular homeostasis chemical homeostasis intracellular monoatomic cation homeostasis regulation of pH monoatomic ion homeostasis intracellular chemical homeostasis regulation of biological quality monoatomic cation homeostasis intracellular monoatomic ion homeostasis vesicle organization cellular component organization organelle organization endosome organization cellular component organization or biogenesis endosomal lumen acidification endomembrane system organization vacuolar acidification	vacuolar membrane membrane-bounded organelle storage vacuole intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle vacuolar membrane membrane-bounded organelle storage vacuole intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle cytoplasm organelle membrane fungal-type vacuole membrane ATPase dependent transmembrane transport complex protein-containing complex ATPase complex membrane protein complex proton-transporting V-type ATPase complex proton-transporting V-type ATPase, V1 domain transporter complex vacuolar proton-transporting V-type ATPase, V1 domain proton-transporting two-sector ATPase complex proton-transporting two-sector ATPase complex, catalytic domain catalytic complex vacuolar proton-transporting V-type ATPase complex cation-transporting ATPase complex transmembrane transporter complex Golgi membrane Golgi apparatus endomembrane system
AA [auth G], BA [auth g]	V-type proton ATPase subunit D	monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity ATPase-coupled transmembrane transporter activity proton-transporting ATPase activity, rotational mechanism ATPase-coupled monoatomic cation transmembrane transporter activity ATP-dependent activity active monoatomic ion transmembrane transporter activity ATPase-coupled ion transmembrane transporter activity active transmembrane transporter activity ATPase activity, coupled to transmembrane movement of ions, rotational mechanism monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity	monoatomic cation transmembrane transport transmembrane transport localization transport proton transmembrane transport monoatomic ion transmembrane transport monoatomic ion transport cellular process monoatomic cation transport establishment of localization homeostatic process biological regulation intracellular pH reduction regulation of intracellular pH monoatomic cation transmembrane transport transmembrane transport localization transport proton transmembrane transport monoatomic ion transmembrane transport monoatomic ion transport cellular process monoatomic cation transport establishment of localization homeostatic process biological regulation intracellular pH reduction regulation of intracellular pH vesicle organization cellular component organization organelle organization cellular homeostasis chemical homeostasis intracellular monoatomic cation homeostasis regulation of pH monoatomic ion homeostasis endosome organization intracellular chemical homeostasis cellular component organization or biogenesis regulation of biological quality endosomal lumen acidification monoatomic cation homeostasis endomembrane system organization intracellular monoatomic ion homeostasis Golgi lumen acidification vacuolar acidification	vacuolar membrane membrane-bounded organelle storage vacuole intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle vacuolar membrane membrane-bounded organelle storage vacuole intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle cytoplasm organelle membrane fungal-type vacuole membrane ATPase dependent transmembrane transport complex protein-containing complex ATPase complex membrane protein complex proton-transporting V-type ATPase complex transporter complex proton-transporting two-sector ATPase complex catalytic complex vacuolar proton-transporting V-type ATPase complex cation-transporting ATPase complex transmembrane transporter complex membrane microdomain membrane raft proton-transporting V-type ATPase, V1 domain vacuolar proton-transporting V-type ATPase, V1 domain proton-transporting two-sector ATPase complex, catalytic domain Golgi membrane Golgi apparatus endomembrane system
H [auth J], K [auth L], M [auth N], U [auth j], X [auth l], H [auth J], K [auth L], M [auth N], U [auth j], X [auth l], Z [auth n]	V-type proton ATPase subunit G	pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity ATP-dependent activity monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity ATPase-coupled transmembrane transporter activity proton-transporting ATPase activity, rotational mechanism ATPase-coupled monoatomic cation transmembrane transporter activity pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity ATP-dependent activity monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity ATPase-coupled transmembrane transporter activity proton-transporting ATPase activity, rotational mechanism ATPase-coupled monoatomic cation transmembrane transporter activity active monoatomic ion transmembrane transporter activity ATPase-coupled ion transmembrane transporter activity active transmembrane transporter activity ATPase activity, coupled to transmembrane movement of ions, rotational mechanism monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity	monoatomic cation transmembrane transport transmembrane transport localization transport proton transmembrane transport monoatomic ion transmembrane transport monoatomic ion transport cellular process monoatomic cation transport establishment of localization homeostatic process biological regulation intracellular pH reduction regulation of intracellular pH monoatomic cation transmembrane transport transmembrane transport localization transport proton transmembrane transport monoatomic ion transmembrane transport monoatomic ion transport cellular process monoatomic cation transport establishment of localization homeostatic process biological regulation intracellular pH reduction regulation of intracellular pH vesicle organization cellular component organization organelle organization cellular homeostasis chemical homeostasis intracellular monoatomic cation homeostasis regulation of pH monoatomic ion homeostasis endosome organization intracellular chemical homeostasis cellular component organization or biogenesis regulation of biological quality endosomal lumen acidification monoatomic cation homeostasis endomembrane system organization intracellular monoatomic ion homeostasis Golgi lumen acidification vacuolar acidification	vacuolar membrane membrane-bounded organelle storage vacuole intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle vacuolar membrane membrane-bounded organelle storage vacuole intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle cytoplasm organelle membrane fungal-type vacuole membrane ATPase dependent transmembrane transport complex protein-containing complex ATPase complex membrane protein complex proton-transporting V-type ATPase complex transporter complex proton-transporting two-sector ATPase complex catalytic complex vacuolar proton-transporting V-type ATPase complex cation-transporting ATPase complex transmembrane transporter complex proton-transporting V-type ATPase, V1 domain vacuolar proton-transporting V-type ATPase, V1 domain proton-transporting two-sector ATPase complex, catalytic domain Golgi membrane Golgi apparatus endomembrane system

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, N [auth a], O [auth b], A, B, C, N [auth a], O [auth b], P [auth c]	IPR036844	Hint domain superfamily	Homologous Superfamily
A, B, C, N [auth a], O [auth b], A, B, C, N [auth a], O [auth b], P [auth c]	IPR022878	V-type ATP synthase catalytic alpha chain	Family
A, B, C, N [auth a], O [auth b], A, B, C, N [auth a], O [auth b], P [auth c]	IPR006142	Intein	Domain
A, B, C, N [auth a], O [auth b], A, B, C, N [auth a], O [auth b], P [auth c]	IPR007868	Hom-end-associated Hint	Domain
A, B, C, N [auth a], O [auth b], A, B, C, N [auth a], O [auth b], P [auth c]	IPR004042	Intein DOD homing endonuclease, central region	Domain
A, B, C, N [auth a], O [auth b], A, B, C, N [auth a], O [auth b], P [auth c]	IPR024034	ATPase, F1/V1 complex, beta/alpha subunit, C-terminal	Homologous Superfamily
A, B, C, N [auth a], O [auth b], A, B, C, N [auth a], O [auth b], P [auth c]	IPR036121	ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily	Homologous Superfamily
A, B, C, N [auth a], O [auth b], A, B, C, N [auth a], O [auth b], P [auth c]	IPR031686	ATPsynthase alpha/beta subunit, barrel-sandwich domain	Domain
A, B, C, N [auth a], O [auth b], A, B, C, N [auth a], O [auth b], P [auth c]	IPR006141	Intein N-terminal splicing region	PTM
A, B, C, N [auth a], O [auth b], A, B, C, N [auth a], O [auth b], P [auth c]	IPR003586	Hint domain C-terminal	Domain
A, B, C, N [auth a], O [auth b], A, B, C, N [auth a], O [auth b], P [auth c]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
A, B, C, N [auth a], O [auth b], A, B, C, N [auth a], O [auth b], P [auth c]	IPR004100	ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain	Domain
A, B, C, N [auth a], O [auth b], A, B, C, N [auth a], O [auth b], P [auth c]	IPR030934	Intein C-terminal splicing region	Conserved Site
A, B, C, N [auth a], O [auth b], A, B, C, N [auth a], O [auth b], P [auth c]	IPR027434	Homing endonuclease	Homologous Superfamily
A, B, C, N [auth a], O [auth b], A, B, C, N [auth a], O [auth b], P [auth c]	IPR023366	ATP synthase subunit alpha, N-terminal domain-like superfamily	Homologous Superfamily
A, B, C, N [auth a], O [auth b], A, B, C, N [auth a], O [auth b], P [auth c]	IPR020003	ATPase, alpha/beta subunit, nucleotide-binding domain, active site	Active Site
A, B, C, N [auth a], O [auth b], A, B, C, N [auth a], O [auth b], P [auth c]	IPR055190	ATP synthase A/B type, C-terminal domain	Domain
A, B, C, N [auth a], O [auth b], A, B, C, N [auth a], O [auth b], P [auth c]	IPR003587	Hint domain N-terminal	Domain
A, B, C, N [auth a], O [auth b], A, B, C, N [auth a], O [auth b], P [auth c]	IPR007869	Homing endonuclease PI-Sce	Domain
D, E, F, Q [auth d], R [auth e], D, E, F, Q [auth d], R [auth e], S [auth f]	IPR000194	ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain	Domain
D, E, F, Q [auth d], R [auth e], D, E, F, Q [auth d], R [auth e], S [auth f]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
D, E, F, Q [auth d], R [auth e], D, E, F, Q [auth d], R [auth e], S [auth f]	IPR004100	ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain	Domain
D, E, F, Q [auth d], R [auth e], D, E, F, Q [auth d], R [auth e], S [auth f]	IPR005723	ATPase, V1 complex, subunit B	Family
D, E, F, Q [auth d], R [auth e], D, E, F, Q [auth d], R [auth e], S [auth f]	IPR022879	V-type ATP synthase regulatory subunit B/beta	Family
D, E, F, Q [auth d], R [auth e], D, E, F, Q [auth d], R [auth e], S [auth f]	IPR020003	ATPase, alpha/beta subunit, nucleotide-binding domain, active site	Active Site
D, E, F, Q [auth d], R [auth e], D, E, F, Q [auth d], R [auth e], S [auth f]	IPR055190	ATP synthase A/B type, C-terminal domain	Domain
G [auth H], T [auth h]	IPR004908	ATPase, V1 complex, subunit H	Family
G [auth H], T [auth h]	IPR016024	Armadillo-type fold	Homologous Superfamily
G [auth H], T [auth h]	IPR011989	Armadillo-like helical	Homologous Superfamily
G [auth H], T [auth h]	IPR038497	ATPase, V1 complex, subunit H, C-terminal domain superfamily	Homologous Superfamily
G [auth H], T [auth h]	IPR011987	ATPase, V1 complex, subunit H, C-terminal	Domain
I, J [auth K], L [auth M], V [auth i], W [auth k], I, J [auth K], L [auth M], V [auth i], W [auth k], Y [auth m]	IPR038495	V-type ATPase subunit E, C-terminal domain superfamily	Homologous Superfamily
I, J [auth K], L [auth M], V [auth i], W [auth k], I, J [auth K], L [auth M], V [auth i], W [auth k], Y [auth m]	IPR002842	V-type ATPase subunit E	Family
CA [auth o], DA [auth O]	IPR036906	ATPase, V1 complex, subunit F superfamily	Homologous Superfamily
CA [auth o], DA [auth O]	IPR005772	ATPase, V1 complex, subunit F, eukaryotic	Family
CA [auth o], DA [auth O]	IPR008218	ATPase, V1 complex, subunit F	Family
AA [auth G], BA [auth g]	IPR002699	ATPase, V1 complex, subunit D	Family
H [auth J], K [auth L], M [auth N], U [auth j], X [auth l], H [auth J], K [auth L], M [auth N], U [auth j], X [auth l], Z [auth n]	IPR005124	Vacuolar (H+)-ATPase G subunit	Family

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A, AA [auth G], B, BA [auth g], C A, AA [auth G], B, BA [auth g], C, CA [auth o], D, DA [auth O], E, F, G [auth H], H [auth J], I, J [auth K], K [auth L], L [auth M], M [auth N], N [auth a], O [auth b], P [auth c], Q [auth d], R [auth e], S [auth f], T [auth h], U [auth j], V [auth i], W [auth k], X [auth l], Y [auth m], Z [auth n]	mpstruc	TRANSMEMBRANE PROTEINS: ALPHA-HELICAL	Vacuolar ATPase (V-ATPase)	Complete V₁-ATPase in auto-inhibited state by cryo-EM