5CYL | pdb_00005cyl

Crystal structure of the CupB6 tip adhesin from Pseudomonas aeruginosa

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H	Lyase_1	e5cylH1	A: alpha arrays	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: Lyase_1	ECOD (v295.2)
G	Dynamin_N	e5cylG1	A: alpha arrays	X: OB-fold	H: Nucleic acid-binding protein	T: Nucleic acid-binding protein	F: Dynamin_N	ECOD (v295.2)
F	Dynamin_N	e5cylF1	A: alpha arrays	X: OB-fold	H: Nucleic acid-binding protein	T: Nucleic acid-binding protein	F: Dynamin_N	ECOD (v295.2)
E	Fer4, Fer4_7, Fer4_10	e5cylE1	A: alpha arrays	X: Rossmann-like	H: Rossmann-related	T: S-adenosyl-L-methionine-dependent methyltransferases	F: Fer4, Fer4_7, Fer4_10	ECOD (v295.2)
D	SelB-wing_3	e5cylD1	A: alpha arrays	X: Type II ABC importer transmembrane domain fold	H: Type II ABC importer transmembrane domain fold	T: Type II ABC importer transmembrane domain fold	F: SelB-wing_3	ECOD (v295.2)
C	Dynamin_N	e5cylC1	A: alpha arrays	X: OB-fold	H: Nucleic acid-binding protein	T: Nucleic acid-binding protein	F: Dynamin_N	ECOD (v295.2)
B	short chain dehydrogenase / Enoyl-(Acyl carrier protein) reductase	e5cylB1	A: alpha arrays	X: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4	H: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4	T: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4	F: short chain dehydrogenase / Enoyl-(Acyl carrier protein) reductase	ECOD (v295.2)
A	tRNA_anti-codon	e5cylA1	A: alpha arrays	X: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4	H: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4	T: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4	F: tRNA_anti-codon	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H	PF00419	Fimbrial protein (Fimbrial)	Fimbrial protein		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H	Fimbrial subunit CupB6	-	cell adhesion involved in biofilm formation cell aggregation biofilm formation biological process involved in intraspecies interaction between organisms cell-substrate adhesion single-species biofilm formation aggregation of unicellular organisms submerged biofilm formation cell adhesion involved in single-species biofilm formation cell adhesion cellular process single-species submerged biofilm formation	pilus cell projection cellular anatomical structure

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR000259	Fimbrial-type adhesion domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR036937	Fimbrial-type adhesion domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR008966	Adhesion domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR050263	Bacterial fimbrial adherence	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.