Crystal structure of SopD, a type III secreted virulence effector from Salmonella enterica
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| B | SCOP2B Superfamily | T3SS effector SopD-like | 8091424 | 3002509 | SCOP2B (2022-06-29) |
| A | SCOP2 Family | T3SS effector SopD-like | 8045846 | 4004722 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | T3SS effector SopD-like | 8091424 | 3002509 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Fumble | e5cpcB1 | A: beta barrels | X: Cytidine deaminase-like | H: KorB C-terminal domain | T: KorB C-terminal domain | F: Fumble | ECOD (v294.2) |
| A | SopD | e5cpcA1 | A: beta barrels | X: Type III secretory system chaperone-like | H: N-terminal domain of secreted effector protein sifA | T: N-terminal domain of secreted effector protein sifA | F: SopD | ECOD (v294.2) |
| A | SopD | e5cpcA2 | A: beta barrels | X: SopD C-terminal domain | H: SopD C-terminal domain | T: SopD C-terminal domain | F: SopD | ECOD (v294.2) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR022747 | Salmonella outer protein D | Family |














