5CM6 | pdb_00005cm6

CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM PSEUDOALTEROMONAS ATLANTICA T6c(Patl_2292, TARGET EFI-510180) WITH BOUND SODIUM AND PYRUVATE

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BCytochrom_C1e5cm6B1 A: alpha arraysX: amino-terminal domain of OmpATbH: amino-terminal domain of OmpATbT: amino-terminal domain of OmpATbF: Cytochrom_C1ECOD (v295.2)
AMolybdopterine5cm6A1 A: alpha arraysX: jelly-rollH: Double-stranded beta-helixT: Double-stranded beta-helixF: MolybdopterinECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.40.190.170 Alpha Beta 3-Layer(aba) Sandwich D-Maltodextrin-Binding Protein domain 2CATH (4.3.0)
B3.40.190.10 Alpha Beta 3-Layer(aba) Sandwich D-Maltodextrin-Binding Protein domain 2CATH (4.3.0)
A3.40.190.170 Alpha Beta 3-Layer(aba) Sandwich D-Maltodextrin-Binding Protein domain 2CATH (4.3.0)
A3.40.190.10 Alpha Beta 3-Layer(aba) Sandwich D-Maltodextrin-Binding Protein domain 2CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
TRAP dicarboxylate transporter-DctP subunit-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR018389TRAP transporter solute receptor DctPFamily
A, B
IPR038404TRAP transporter solute receptor DctP superfamilyHomologous Superfamily
A, B
IPR026289Solute binding protein, TakP-likeFamily