Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilySigma factor domain-like8091436 3000953 SCOP2B (2022-06-29)
BSCOP2B SuperfamilySigma factor domain-like8091436 3000953 SCOP2B (2022-06-29)
ESCOP2B SuperfamilySigma factor domain-like8091436 3000953 SCOP2B (2022-06-29)
FSCOP2B SuperfamilySigma factor domain-like8091436 3000953 SCOP2B (2022-06-29)
ISCOP2B SuperfamilySigma factor domain-like8091436 3000953 SCOP2B (2022-06-29)
JSCOP2B SuperfamilySigma factor domain-like8091436 3000953 SCOP2B (2022-06-29)
MSCOP2B SuperfamilySigma factor domain-like8091436 3000953 SCOP2B (2022-06-29)
NSCOP2B SuperfamilySigma factor domain-like8091436 3000953 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF16509e5clvA1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF16509ECOD (1.6)
BPF16509e5clvB1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF16509ECOD (1.6)
EPF16509e5clvE1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF16509ECOD (1.6)
FPF16509e5clvF1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF16509ECOD (1.6)
IPF16509e5clvI1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF16509ECOD (1.6)
JPF16509e5clvJ1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF16509ECOD (1.6)
MPF16509e5clvM1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF16509ECOD (1.6)
NPF16509e5clvN1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF16509ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF16509TrfB plasmid transcriptional repressor (KORA)TrfB plasmid transcriptional repressorKORA is a family of Gram-negative bacterial proteins that act as global repressors of genes involved in plasmid replication, conjugative transfer and stable inheritance in the IncP group of plasmids. KORA operates as a symmetric dimer, and contacts t ...KORA is a family of Gram-negative bacterial proteins that act as global repressors of genes involved in plasmid replication, conjugative transfer and stable inheritance in the IncP group of plasmids. KORA operates as a symmetric dimer, and contacts the DNA via the helix-turn-helix region at the N-terminus [1].
Domain
E, F, I, J, M
PF16509TrfB plasmid transcriptional repressor (KORA)TrfB plasmid transcriptional repressorKORA is a family of Gram-negative bacterial proteins that act as global repressors of genes involved in plasmid replication, conjugative transfer and stable inheritance in the IncP group of plasmids. KORA operates as a symmetric dimer, and contacts t ...KORA is a family of Gram-negative bacterial proteins that act as global repressors of genes involved in plasmid replication, conjugative transfer and stable inheritance in the IncP group of plasmids. KORA operates as a symmetric dimer, and contacts the DNA via the helix-turn-helix region at the N-terminus [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
TrfB transcriptional repressor protein - -
C, D, G, H, K
5'-D(CP*CP*AP*AP*GP*TP*TP*TP*AP*GP*CP*TP*AP*AP*AP*CP*TP*TP*GP*GP*)-3'---
E, F, I, J, M
TrfB transcriptional repressor protein - -

InterPro: Protein Family Classification InterPro Database Homepage