5CL3 | pdb_00005cl3

Alkylpurine DNA glycosylase AlkD bound to DNA containing a 3-methyladenine analog (100% substrate at 4 hours)

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyARM repeat-like 8086910 3000116 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Ae5cl3A1 A: P-loop domains-likeX: P-loop domains-relatedH: P-loop containing nucleoside triphosphate hydrolasesT: RNA_ligaseF:ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.25.10.90 Mainly Alpha Alpha Horseshoe Leucine-rich Repeat Variant CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF08713DNA alkylation repair enzyme (DNA_alkylation)DNA alkylation repair enzyme- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
DNA (5'-D(*CP*GP*GP*AP*CP*TP*TP*TP*CP*GP*GP*G)-3')---
DNA (5'-D(*CP*CP*CP*GP*AP*(DZM)P*AP*GP*TP*CP*CP*G)-3')---
AlkD - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR014825DNA alkylation repair enzymeFamily
IPR016024Armadillo-type foldHomologous Superfamily