5CD6 | pdb_00005cd6

Crystal structure of a TPR-domain containing protein (BDI_1685) from Parabacteroides distasonis ATCC 8503 at 2.26 A resolution

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
C	SCOP2 Family	BDI_1685 N-terminal domain-like	8046486	4005113	SCOP2 (2022-06-29)
C	SCOP2 Family	BDI_1685 C-terminal domain-like	8101879	4007819	SCOP2 (2022-06-29)
C	SCOP2 Superfamily	Galactose mutarotase-like	8101878	3000035	SCOP2 (2022-06-29)
C	SCOP2 Superfamily	TPR-like	8101880	3001345	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	TPR-like	8101880	3001345	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Galactose mutarotase-like	8101878	3000035	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	TPR-like	8101880	3001345	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Galactose mutarotase-like	8101878	3000035	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C	DUF5107	e5cd6C1	A: beta sandwiches	X: Glycosyl hydrolase domain-like	H: supersandwich (From Topology)	T: supersandwich	F: DUF5107	ECOD (1.6)
C	EUF08224	e5cd6C2	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: EUF08224	ECOD (1.6)
B	DUF5107	e5cd6B2	A: beta sandwiches	X: Glycosyl hydrolase domain-like	H: supersandwich (From Topology)	T: supersandwich	F: DUF5107	ECOD (1.6)
B	EUF08224	e5cd6B1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: EUF08224	ECOD (1.6)
A	DUF5107	e5cd6A1	A: beta sandwiches	X: Glycosyl hydrolase domain-like	H: supersandwich (From Topology)	T: supersandwich	F: DUF5107	ECOD (1.6)
A	EUF08224	e5cd6A2	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: EUF08224	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C	PF22256	BDI_1685-like, C-terminal domain (BDI_1685-like_C)	BDI_1685-like, C-terminal domain	-	Repeat
A, B, C	PF17128	Domain of unknown function (DUF5107) (DUF5107)	Domain of unknown function (DUF5107)	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C	TPR-domain containing protein	cation binding ion binding binding metal ion binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C	IPR053983	BDI_1685-like, C-terminal domain	Domain
A, B, C	IPR033396	Domain of unknown function DUF5107	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.