5C8Q | pdb_00005c8q

Crystal structure of MoCVNH3 variant (Mo0v) in complex with (N-GlcNAc)4

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth B]BONe5c8qB1 A: alpha bundlesX: Repetitive alpha hairpinsH: C2 domainT: C2 domainF: BONECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A [auth B]2.30.60.10 Mainly Beta Roll HIV-inactivating Protein, Cyanovirin-n Cyanovirin-NCATH (4.3.0)
A [auth B]3.10.350.10 Alpha Beta Roll Membrane-bound Lytic Murein Transglycosylase D Chain ACATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth B]PF08881CVNH domain (CVNH)CVNH domainCyanoVirin-N Homology domains are found in the sugar-binding antiviral protein cyanovirin-N (CVN) as well as filamentous ascomycetes and in the fern Ceratopteris richardii. Domain
A [auth B]PF01476LysM domain (LysM)LysM domainThe LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation [1]. This domain may have a general peptidoglycan binding function. The structure of this domain is known [2]. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth B]MoCVNH3 variant- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth B]IPR036673Cyanovirin-N superfamilyHomologous Superfamily
A [auth B]IPR011058Cyanovirin-NDomain
A [auth B]IPR036779LysM domain superfamilyHomologous Superfamily
A [auth B]IPR018392LysM domainDomain