5C5S
Crystal Structure of human Myosin 9b RhoGAP domain at 2.2 angstrom
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d5c5sa1 | All alpha proteins | GTPase activation domain, GAP | GTPase activation domain, GAP | automated matches | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
A | d5c5sa2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d5c5sb_ | All alpha proteins | GTPase activation domain, GAP | GTPase activation domain, GAP | automated matches | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
C | d5c5sc_ | All alpha proteins | GTPase activation domain, GAP | GTPase activation domain, GAP | automated matches | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
D | d5c5sd_ | All alpha proteins | GTPase activation domain, GAP | GTPase activation domain, GAP | automated matches | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | GTPase activation domain GAP | 8079463 | 3001163 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | GTPase activation domain GAP | 8079463 | 3001163 | SCOP2B (2022-06-29) |
C | SCOP2 Family | BCR-homology GTPase activation domain (RhoGAP-domain) | 8079462 | 4001255 | SCOP2 (2022-06-29) |
C | SCOP2 Superfamily | GTPase activation domain GAP | 8079463 | 3001163 | SCOP2 (2022-06-29) |
D | SCOP2B Superfamily | GTPase activation domain GAP | 8079463 | 3001163 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00620 | e5c5sA1 | A: alpha bundles | X: GTPase activation domain, GAP (From Topology) | H: GTPase activation domain, GAP (From Topology) | T: GTPase activation domain, GAP | F: PF00620 | ECOD (1.6) |
B | PF00620 | e5c5sB1 | A: alpha bundles | X: GTPase activation domain, GAP (From Topology) | H: GTPase activation domain, GAP (From Topology) | T: GTPase activation domain, GAP | F: PF00620 | ECOD (1.6) |
C | PF00620 | e5c5sC1 | A: alpha bundles | X: GTPase activation domain, GAP (From Topology) | H: GTPase activation domain, GAP (From Topology) | T: GTPase activation domain, GAP | F: PF00620 | ECOD (1.6) |
D | PF00620 | e5c5sD1 | A: alpha bundles | X: GTPase activation domain, GAP (From Topology) | H: GTPase activation domain, GAP (From Topology) | T: GTPase activation domain, GAP | F: PF00620 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.555.10 | Mainly Alpha | Orthogonal Bundle | Phosphatidylinositol 3-kinase | Chain A | CATH (4.3.0) |
B | 1.10.555.10 | Mainly Alpha | Orthogonal Bundle | Phosphatidylinositol 3-kinase | Chain A | CATH (4.3.0) |
C | 1.10.555.10 | Mainly Alpha | Orthogonal Bundle | Phosphatidylinositol 3-kinase | Chain A | CATH (4.3.0) |
D | 1.10.555.10 | Mainly Alpha | Orthogonal Bundle | Phosphatidylinositol 3-kinase | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036961 | Kinesin motor domain superfamily | Homologous Superfamily | |
IPR046987 | Unconventional class IX myosin | Family | |
IPR008936 | Rho GTPase activation protein | Homologous Superfamily | |
IPR000048 | IQ motif, EF-hand binding site | Binding Site | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR000198 | Rho GTPase-activating protein domain | Domain | |
IPR002219 | Protein kinase C-like, phorbol ester/diacylglycerol-binding domain | Domain | |
IPR000159 | Ras-associating domain | Domain | |
IPR036023 | Class IX myosin, motor domain | Domain | |
IPR028557 | Unconventional myosin-IXb, Rho-GAP domain | Domain | |
IPR001609 | Myosin head, motor domain | Domain | |
IPR029071 | Ubiquitin-like domain superfamily | Homologous Superfamily | |
IPR046349 | C1-like domain superfamily | Homologous Superfamily | |
IPR046989 | Unconventional myosin-IXb, RA domain | Domain |