5BY2 | pdb_00005by2

Sedoheptulose 7-phosphate isomerase from Colwellia psychrerythraea strain 34H

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d5by2a1	Alpha and beta proteins (a/b)	SIS domain	SIS domain	mono-SIS domain	automated matches	(Colwellia psychrerythraea 34H ) [TaxId: 167879 ],	SCOPe (2.08)
A	d5by2a2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Colwellia psychrerythraea 34H ) [TaxId: 167879 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	mono-SIS domain	8088707	4003354	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	SIS domain/Ribosomal protein S2-like	8088708	3001397	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PI3_PI4_kinase	e5by2A1	A: a/b three-layered sandwiches	X: Restriction endonuclease-like	H: Restriction endonuclease-like	T: Restriction endonuclease-like	F: PI3_PI4_kinase	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.40.50.10490	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Glucose-6-phosphate isomerase like protein	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Phosphoheptose isomerase	binding carbohydrate derivative binding cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding isomerase activity D-sedoheptulose 7-phosphate isomerase activity intramolecular phosphotransferase activity catalytic activity intramolecular transferase activity	carbohydrate derivative biosynthetic process carbohydrate derivative metabolic process D-glycero-D-manno-heptose 7-phosphate biosynthetic process biosynthetic process organophosphate metabolic process organophosphate biosynthetic process phosphate-containing compound metabolic process metabolic process cellular process phosphorus metabolic process D-glycero-D-manno-heptose 7-phosphate metabolic process carbohydrate metabolic process primary metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR046348	SIS domain superfamily	Homologous Superfamily
A	IPR004515	Phosphoheptose isomerase	Family
A	IPR050099	SIS family GmhA and DiaA subfamilies	Family
A	IPR001347	SIS domain	Domain
A	IPR035461	GmhA/DiaA	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.