5BWE | pdb_00005bwe

Benzylsuccinate synthase alpha-beta-gamma complex with bound toluene and fumarate

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	PFL-like glycyl radical enzymes	8098210	3001069	SCOP2B (2022-06-29)
A	SCOP2 Family	PFL-like	8098209	4003576	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	PFL-like glycyl radical enzymes	8098210	3001069	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F [auth G]	DHFR_1	e5bweG1	A: a/b three-layered sandwiches	X: Rossmann-like	H: 26S proteasome subunit Rpn2 C-terminal domain	T: 26S proteasome subunit Rpn2 C-terminal domain	F: DHFR_1	ECOD (v294.1)
C	DHFR_1	e5bweC1	A: a/b three-layered sandwiches	X: Rossmann-like	H: 26S proteasome subunit Rpn2 C-terminal domain	T: 26S proteasome subunit Rpn2 C-terminal domain	F: DHFR_1	ECOD (v294.1)
E [auth F]	DHFR_1	e5bweF1	A: a/b three-layered sandwiches	X: Rossmann-like	H: 26S proteasome subunit Rpn2 C-terminal domain	T: 26S proteasome subunit Rpn2 C-terminal domain	F: DHFR_1	ECOD (v294.1)
B	DHFR_1	e5bweB1	A: a/b three-layered sandwiches	X: Rossmann-like	H: 26S proteasome subunit Rpn2 C-terminal domain	T: 26S proteasome subunit Rpn2 C-terminal domain	F: DHFR_1	ECOD (v294.1)
D	Ribosomal_S5_C	e5bweD1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: Hemagglutinin HA2 chain	T: Hemagglutinin HA2 chain	F: Ribosomal_S5_C	ECOD (v294.1)
A	Ribosomal_S5_C	e5bweA1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: Hemagglutinin HA2 chain	T: Hemagglutinin HA2 chain	F: Ribosomal_S5_C	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
E [auth F]	4.10.490.20	Few Secondary Structures	Irregular	High-Potential Iron-Sulfur Protein	Chain A	CATH (4.3.0)
B	4.10.490.20	Few Secondary Structures	Irregular	High-Potential Iron-Sulfur Protein	Chain A	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C, F [auth G]	benzylsuccinate synthase gamma chain	-	-	-
B, E [auth F]	benzylsuccinate synthase beta chain	iron-sulfur cluster binding binding 4 iron, 4 sulfur cluster binding metal cluster binding small molecule binding cation binding ion binding metal ion binding	-	-
A, D	benzylsuccinate synthase alpha chain	lyase activity catalytic activity	-	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C, F [auth G]	IPR013161	Benzylsuccinate synthase gamma subunit	Family
C, F [auth G]	IPR038640	Benzylsuccinate synthase gamma subunit superfamily	Homologous Superfamily
B, E [auth F]	IPR040565	Benzylsuccinate synthase beta subunit	Domain
B, E [auth F]	IPR053760	Benzylsuccinate Synthase-like	Homologous Superfamily
A, D	IPR051215	Glycyl Radical Enzyme	Family
A, D	IPR004184	Pyruvate formate lyase domain	Domain
A, D	IPR001150	Glycine radical domain	Domain
A, D	IPR019777	Formate C-acetyltransferase glycine radical, conserved site	Conserved Site

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.