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 5B70 | pdb_00005b70

OxyR2 E204G regulatory domain from Vibrio vulnificus

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Dd5b70d1 Alpha and beta proteins (a/b) Periplasmic binding protein-like II Periplasmic binding protein-like II automated matches automated matches (Vibrio vulnificus ) [TaxId: 672 ], SCOPe (2.08)
Dd5b70d2 Artifacts Tags Tags Tags N-terminal Tags (Vibrio vulnificus ) [TaxId: 672 ], SCOPe (2.08)
Cd5b70c1 Alpha and beta proteins (a/b) Periplasmic binding protein-like II Periplasmic binding protein-like II automated matches automated matches (Vibrio vulnificus ) [TaxId: 672 ], SCOPe (2.08)
Cd5b70c2 Artifacts Tags Tags Tags N-terminal Tags (Vibrio vulnificus ) [TaxId: 672 ], SCOPe (2.08)
Bd5b70b1 Alpha and beta proteins (a/b) Periplasmic binding protein-like II Periplasmic binding protein-like II automated matches automated matches (Vibrio vulnificus ) [TaxId: 672 ], SCOPe (2.08)
Bd5b70b2 Artifacts Tags Tags Tags N-terminal Tags (Vibrio vulnificus ) [TaxId: 672 ], SCOPe (2.08)
Ad5b70a1 Alpha and beta proteins (a/b) Periplasmic binding protein-like II Periplasmic binding protein-like II automated matches automated matches (Vibrio vulnificus ) [TaxId: 672 ], SCOPe (2.08)
Ad5b70a2 Artifacts Tags Tags Tags N-terminal Tags (Vibrio vulnificus ) [TaxId: 672 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B SuperfamilyType 2 solute binding protein-like 8075982 3000083 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyType 2 solute binding protein-like 8075982 3000083 SCOP2B (2022-06-29)
BSCOP2 FamilyPhosphate binding protein-like 8075981 4000229 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyType 2 solute binding protein-like 8075982 3000083 SCOP2 (2022-06-29)
ASCOP2B SuperfamilyType 2 solute binding protein-like 8075982 3000083 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DSMC_Ne5b70D1 A: alpha arraysX: Cytochrome P450H: Cytochrome P450T: Cytochrome P450F: SMC_NECOD (v295.2)
CSMC_Ne5b70C1 A: alpha arraysX: Cytochrome P450H: Cytochrome P450T: Cytochrome P450F: SMC_NECOD (v295.2)
BSMC_Ne5b70B1 A: alpha arraysX: Cytochrome P450H: Cytochrome P450T: Cytochrome P450F: SMC_NECOD (v295.2)
ASMC_Ne5b70A1 A: alpha arraysX: Cytochrome P450H: Cytochrome P450T: Cytochrome P450F: SMC_NECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D3.40.190.10 Alpha Beta 3-Layer(aba) Sandwich D-Maltodextrin-Binding Protein domain 2CATH (4.3.0)
C3.40.190.10 Alpha Beta 3-Layer(aba) Sandwich D-Maltodextrin-Binding Protein domain 2CATH (4.3.0)
B3.40.190.10 Alpha Beta 3-Layer(aba) Sandwich D-Maltodextrin-Binding Protein domain 2CATH (4.3.0)
A3.40.190.10 Alpha Beta 3-Layer(aba) Sandwich D-Maltodextrin-Binding Protein domain 2CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
LysR family transcriptional regulator -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR005119LysR, substrate-bindingDomain
A, B, C, D
IPR000847LysR, HTH, N-terminal domainDomain
A, B, C, D
IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
A, B, C, D
IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily