Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF21069e5b2qA5 A: alpha complex topologyX: CRISPR-associated endonuclease Cas9 alpha-helical lobeH: F. novicida CRISPR-associated endonuclease Cas9 alpha-helical lobe (From Topology)T: F. novicida CRISPR-associated endonuclease Cas9 alpha-helical lobeF: PF21069ECOD (1.6)
AF_UNCLASSIFIEDe5b2qA4 A: a+b two layersX: SSHS domainH: SSHS domain in CRISPR-associated endonuclease Cas9 (From Topology)T: SSHS domain in CRISPR-associated endonuclease Cas9F: F_UNCLASSIFIEDECOD (1.6)
APF22385e5b2qA2 A: a+b complex topologyX: CRISPR-associated endonuclease Cas9 C-terminal domain (From Topology)H: CRISPR-associated endonuclease Cas9 C-terminal domain (From Topology)T: CRISPR-associated endonuclease Cas9 C-terminal domainF: PF22385ECOD (1.6)
AF_UNCLASSIFIEDe5b2qA6 A: a+b complex topologyX: CRISPR-associated endonuclease Cas9 wedge domain (From Topology)H: CRISPR-associated endonuclease Cas9 wedge domain (From Topology)T: CRISPR-associated endonuclease Cas9 wedge domainF: F_UNCLASSIFIEDECOD (1.6)
AF_UNCLASSIFIEDe5b2qA1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: F_UNCLASSIFIEDECOD (1.6)
AF_UNCLASSIFIEDe5b2qA3 A: few secondary structure elementsX: His-Me finger endonucleases (From Homology)H: His-Me finger endonucleasesT: His-Me finger endonucleasesF: F_UNCLASSIFIEDECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF21069CRISPR-associated endonuclease Cas9 alpha-helical lobe (Csx12)CRISPR-associated endonuclease Cas9 alpha-helical lobeThis entry represents the alpha-helical lobe of the Francisella novicida Cas9 protein.Domain