Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyARM repeat-like 8057079 3000116 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyARM repeat-like 8057080 3000116 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyARM repeat-like 8057080 3000116 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyARM repeat-like 8057079 3000116 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyARM repeat-like 8057079 3000116 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyARM repeat-like 8057080 3000116 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyARM repeat-like 8057079 3000116 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyARM repeat-like 8057080 3000116 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyARM repeat-like 8057079 3000116 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyARM repeat-like 8057080 3000116 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyARM repeat-like 8057080 3000116 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyARM repeat-like 8057079 3000116 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ANot1e5ajdA1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: Not1ECOD (1.6)
CNot1e5ajdC1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: Not1ECOD (1.6)
ENot1e5ajdE1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: Not1ECOD (1.6)
GNot1e5ajdG1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: Not1ECOD (1.6)
INot1e5ajdI1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: Not1ECOD (1.6)
KNot1e5ajdK1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: Not1ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.25.40.790 Mainly Alpha Alpha Horseshoe Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat CATH (4.3.0)
A1.25.40.800 Mainly Alpha Alpha Horseshoe Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat CATH (4.3.0)
C1.25.40.790 Mainly Alpha Alpha Horseshoe Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat CATH (4.3.0)
C1.25.40.800 Mainly Alpha Alpha Horseshoe Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat CATH (4.3.0)
E1.25.40.790 Mainly Alpha Alpha Horseshoe Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat CATH (4.3.0)
E1.25.40.800 Mainly Alpha Alpha Horseshoe Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat CATH (4.3.0)
G1.25.40.790 Mainly Alpha Alpha Horseshoe Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat CATH (4.3.0)
G1.25.40.800 Mainly Alpha Alpha Horseshoe Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat CATH (4.3.0)
I1.25.40.790 Mainly Alpha Alpha Horseshoe Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat CATH (4.3.0)
I1.25.40.800 Mainly Alpha Alpha Horseshoe Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat CATH (4.3.0)
K1.25.40.790 Mainly Alpha Alpha Horseshoe Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat CATH (4.3.0)
K1.25.40.800 Mainly Alpha Alpha Horseshoe Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, C, E, G, I
PF04054CCR4-Not complex component, Not1 (Not1)CCR4-Not complex component, Not1- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, C, E, G, I
CDC39P
B, D, F, H, J
GENERAL NEGATIVE REGULATOR OF TRANSCRIPTION SUBUNIT 4

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, C, E, G, I
IPR032193CCR4-NOT transcription complex subunit 1, TTP binding domainDomain
A, C, E, G, I
IPR032195CCR4-NOT transcription complex subunit 1, HEAT repeat 1Domain
A, C, E, G, I
IPR038535CCR4-NOT subunit 1, TTP binding domain superfamilyHomologous Superfamily
A, C, E, G, I
IPR040398CCR4-NOT transcription complex subunit 1Family
A, C, E, G, I
IPR024557CCR4-NOT transcription complex subunit 1, domain 4Domain
A, C, E, G, I
IPR007196CCR4-Not complex component, Not1, C-terminalDomain
A, C, E, G, I
IPR032194CCR4-NOT transcription complex subunit 1, HEAT repeatDomain
A, C, E, G, I
IPR032191CCR4-NOT transcription complex subunit 1, CAF1-binding domainDomain
B, D, F, H, J
IPR003954RNA recognition motif domain, eukaryoteDomain
B, D, F, H, J
IPR039515NOT4, modified RING finger, HC subclass (C4C4-type)Domain
B, D, F, H, J
IPR000504RNA recognition motif domainDomain
B, D, F, H, J
IPR000571Zinc finger, CCCH-typeDomain
B, D, F, H, J
IPR013083Zinc finger, RING/FYVE/PHD-typeHomologous Superfamily
B, D, F, H, J
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
B, D, F, H, J
IPR034261CNOT4, RNA recognition motifDomain
B, D, F, H, J
IPR039780CCR4-NOT transcription complex subunit 4Family
B, D, F, H, J
IPR001841Zinc finger, RING-typeDomain
B, D, F, H, J
IPR035979RNA-binding domain superfamilyHomologous Superfamily