Annotations: 5AJ3

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
BA [auth h]	SCOP2B Superfamily	Mitochondrial 28S ribosomal protein S31-like	8090912	3002471	SCOP2B (2022-06-29)
B	SCOP2 Family	Ribosomal protein S2-like	8063847	4003744	SCOP2 (2022-06-29)
B	SCOP2 Superfamily	SIS domain/Ribosomal protein S2-like	8063848	3001397	SCOP2 (2022-06-29)
K [auth N]	SCOP2 Family	Ribosomal protein S14p/S29e	8047583	4003647	SCOP2 (2022-06-29)
K [auth N]	SCOP2 Superfamily	Glucocorticoid receptor-like (DNA-binding domain)	8052589	3000068	SCOP2 (2022-06-29)
J [auth L]	SCOP2B Superfamily	Nucleic acid-binding proteins	8096284	3000135	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
I [auth K]	DAP3	e5aj3K1	A: a/b three-layered sandwiches	X: HTH	H: HTH	T: Three-helical HTH	F: DAP3	ECOD (v294.1)
H [auth J]	Tim44	e5aj3J1	A: a/b three-layered sandwiches	X: Bromodomain-like	H: HTH	T: Three-helical HTH	F: Tim44	ECOD (v294.1)
G [auth I]	Tim44	e5aj3I1	A: a/b three-layered sandwiches	X: Bromodomain-like	H: HTH	T: Three-helical HTH	F: Tim44	ECOD (v294.1)
F [auth G]	Tim44	e5aj3G1	A: a/b three-layered sandwiches	X: Bromodomain-like	H: HTH	T: Three-helical HTH	F: Tim44	ECOD (v294.1)
E [auth F]	Tim44	e5aj3F1	A: a/b three-layered sandwiches	X: Bromodomain-like	H: HTH	T: Three-helical HTH	F: Tim44	ECOD (v294.1)
D [auth E]	Tim44	e5aj3E1	A: a/b three-layered sandwiches	X: Bromodomain-like	H: HTH	T: Three-helical HTH	F: Tim44	ECOD (v294.1)
IA [auth p]	Fe_bilin_red	e5aj3p1	A: a/b three-layered sandwiches	X: HTH	H: HTH	T: Three-helical HTH	F: Fe_bilin_red	ECOD (v294.1)
GA [auth n]	FlaF_Ig-like	e5aj3n1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: FlaF_Ig-like	ECOD (v294.1)
FA [auth m]	Fe_bilin_red	e5aj3m1	A: a/b three-layered sandwiches	X: HTH	H: HTH	T: Three-helical HTH	F: Fe_bilin_red	ECOD (v294.1)
EA [auth k]	FlaF_Ig-like	e5aj3k1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: FlaF_Ig-like	ECOD (v294.1)
C	Tim44	e5aj3C1	A: a/b three-layered sandwiches	X: Bromodomain-like	H: HTH	T: Three-helical HTH	F: Tim44	ECOD (v294.1)
DA [auth j]	FlaF_Ig-like	e5aj3j1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: FlaF_Ig-like	ECOD (v294.1)
CA [auth i]	FlaF_Ig-like	e5aj3i1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: FlaF_Ig-like	ECOD (v294.1)
BA [auth h]	FlaF_Ig-like	e5aj3h1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: FlaF_Ig-like	ECOD (v294.1)
AA [auth g]	DAP3	e5aj3g1	A: a/b three-layered sandwiches	X: HTH	H: HTH	T: Three-helical HTH	F: DAP3	ECOD (v294.1)
AA [auth g]	Fe_bilin_red	e5aj3g2	A: a/b three-layered sandwiches	X: HTH	H: HTH	T: Three-helical HTH	F: Fe_bilin_red	ECOD (v294.1)
Z [auth f]	Tim44	e5aj3f1	A: a/b three-layered sandwiches	X: Bromodomain-like	H: HTH	T: Three-helical HTH	F: Tim44	ECOD (v294.1)
X [auth d]	FlaF_Ig-like	e5aj3d1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: FlaF_Ig-like	ECOD (v294.1)
W [auth c]	DAP3	e5aj3c1	A: a/b three-layered sandwiches	X: HTH	H: HTH	T: Three-helical HTH	F: DAP3	ECOD (v294.1)
V [auth b]	FlaF_Ig-like	e5aj3b1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: FlaF_Ig-like	ECOD (v294.1)
U [auth a]	FlaF_Ig-like	e5aj3a1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: FlaF_Ig-like	ECOD (v294.1)
B	FlaF_Ig-like	e5aj3B1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: FlaF_Ig-like	ECOD (v294.1)
Q [auth U]	Tim44	e5aj3U1	A: a/b three-layered sandwiches	X: Bromodomain-like	H: HTH	T: Three-helical HTH	F: Tim44	ECOD (v294.1)
O [auth R]	DAP3	e5aj3R1	A: a/b three-layered sandwiches	X: HTH	H: HTH	T: Three-helical HTH	F: DAP3	ECOD (v294.1)
N [auth Q]	Ribosomal_S17,Ribosomal_S17_N	e5aj3Q1	A: a/b three-layered sandwiches	X: OB-fold	H: Nucleic acid-binding protein	T: Nucleic acid-binding protein	F: Ribosomal_S17,Ribosomal_S17_N	ECOD (v294.1)
M [auth P]	Tim44	e5aj3P1	A: a/b three-layered sandwiches	X: Bromodomain-like	H: HTH	T: Three-helical HTH	F: Tim44	ECOD (v294.1)
L [auth O]	Tim44	e5aj3O1	A: a/b three-layered sandwiches	X: Bromodomain-like	H: HTH	T: Three-helical HTH	F: Tim44	ECOD (v294.1)
K [auth N]	Tim44	e5aj3N1	A: a/b three-layered sandwiches	X: Bromodomain-like	H: HTH	T: Three-helical HTH	F: Tim44	ECOD (v294.1)
J [auth L]	Tim44	e5aj3L1	A: a/b three-layered sandwiches	X: Bromodomain-like	H: HTH	T: Three-helical HTH	F: Tim44	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
I [auth K]	3.30.420.80	Alpha Beta	2-Layer Sandwich	Nucleotidyltransferase	domain 5	CATH (4.3.0)
E [auth F]	3.30.70.60	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Ribosomal protein S6/Translation elongation factor EF1B	CATH (4.3.0)
D [auth E]	3.30.230.10	Alpha Beta	2-Layer Sandwich	Ribosomal Protein S5	domain 2	CATH (utative)
N [auth Q]	2.40.50.140	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	Nucleic acid-binding proteins	CATH (4.3.0)
M [auth P]	3.30.1320.10	Alpha Beta	2-Layer Sandwich	S16 Ribosomal Protein	Chain: A	CATH (4.3.0)
K [auth N]	1.10.287.1480	Mainly Alpha	Orthogonal Bundle	Helix Hairpins		CATH (4.3.0)
J [auth L]	2.40.50.140	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	Nucleic acid-binding proteins	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
I [auth K]	PF10213	Mitochondrial ribosomal subunit protein (MRP-S28)	Mitochondrial ribosomal subunit protein	-	Family
H [auth J]	PF00338	Ribosomal protein S10p/S20e (Ribosomal_S10)	Ribosomal protein S10p/S20e	This family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.	Domain
G [auth I]	PF08293	Mitochondrial ribosomal subunit S27 (MRP-S33)	Mitochondrial ribosomal subunit S27	-	Family
F [auth G]	PF10236	Mitochondrial ribosomal death-associated protein 3 (DAP3)	Mitochondrial ribosomal death-associated protein 3	-	Family
D [auth E]	PF21251	Small ribosomal subunit protein uS5m, N-terminal (Ribosomal_uS5m_N)	Small ribosomal subunit protein uS5m, N-terminal	This entry represents an extension found at the N-terminal of the mitochondrial 28S Small ribosomal subunit protein uS5m [1,2]. This region lines a part of the mRNA entry path and connects the 28S subunit body to the head forming a latch across the m ...	This entry represents an extension found at the N-terminal of the mitochondrial 28S Small ribosomal subunit protein uS5m [1,2]. This region lines a part of the mRNA entry path and connects the 28S subunit body to the head forming a latch across the mRNA channel entrance [2].	Domain
D [auth E]	PF03719	Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)	Ribosomal protein S5, C-terminal domain		Domain
D [auth E]	PF00333	Ribosomal protein S5, N-terminal domain (Ribosomal_S5)	Ribosomal protein S5, N-terminal domain		Domain
C	PF14955	Mitochondrial ribosome subunit S24 (MRP-S24)	Mitochondrial ribosome subunit S24	-	Family
C	PF05047	Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain (L51_S25_CI-B8)	Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain	The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all member ...	The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all members of this family form part of the NADH-ubiquinone oxidoreductase and whether they are also all ribosomal proteins. Structurally related to thioredoxin-fold.	Domain
B	PF00318	Ribosomal protein S2 (Ribosomal_S2)	Ribosomal protein S2	-	Family
O [auth R]	PF01084	Ribosomal protein S18 (Ribosomal_S18)	Ribosomal protein S18	-	Family
N [auth Q]	PF00366	Ribosomal protein S17 (Ribosomal_S17)	Ribosomal protein S17		Domain
M [auth P]	PF01084	Ribosomal protein S18 (Ribosomal_S18)	Ribosomal protein S18	-	Family
L [auth O]	PF22330	Small ribosomal subunit protein mS39, PPR (Rib_mS39_PPR)	Small ribosomal subunit protein mS39, PPR	-	Repeat
K [auth N]	PF00253	Ribosomal protein S14p/S29e (Ribosomal_S14)	Ribosomal protein S14p/S29e	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
I [auth K]	MITORIBOSOMAL PROTEIN US11M, MRPS11	-	-	-
H [auth J]	MITORIBOSOMAL PROTEIN US10M, MRPS10	-	-	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial small ribosomal subunit ribosomal subunit membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial small ribosomal subunit ribosomal subunit organellar ribosome membraneless organelle organellar small ribosomal subunit ribosome mitochondrial protein-containing complex mitochondrial ribosome small ribosomal subunit intracellular membraneless organelle organelle lumen ribonucleoprotein complex
G [auth I]	MITORIBOSOMAL PROTEIN US9M, MRPS9	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope cellular anatomical structure organelle mitochondrial envelope cytoplasm membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope cellular anatomical structure organelle mitochondrial envelope cytoplasm organelle membrane protein-containing complex ribonucleoprotein complex membraneless organelle intracellular membraneless organelle ribosome organelle lumen membrane-enclosed lumen intracellular organelle lumen
F [auth G]	MITORIBOSOMAL PROTEIN US7M, MRPS7	-	-	-
E [auth F]	MITORIBOSOMAL PROTEIN BS6M, MRPS6	-	-	-
D [auth E]	MITORIBOSOMAL PROTEIN US5M, MRPS5	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope cellular anatomical structure organelle mitochondrial envelope cytoplasm membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope cellular anatomical structure organelle mitochondrial envelope cytoplasm organelle membrane protein-containing complex membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial small ribosomal subunit ribosomal subunit organellar ribosome membraneless organelle organellar small ribosomal subunit ribosome mitochondrial protein-containing complex mitochondrial ribosome small ribosomal subunit intracellular membraneless organelle organelle lumen ribonucleoprotein complex
KA [auth z]	UNASSIGNED HELICES	-	-	-
JA [auth s]	UNASSIGNED HELICES	-	-	-
IA [auth p]	MITORIBOSOMAL PROTEIN MS40, MRPS18B	structural molecule activity structural constituent of ribosome	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle cell junction nucleus membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle cell junction nucleus membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen protein-containing complex mitochondrial matrix mitochondrial small ribosomal subunit ribosomal subunit organellar ribosome membraneless organelle organellar small ribosomal subunit ribosome mitochondrial protein-containing complex mitochondrial ribosome small ribosomal subunit intracellular membraneless organelle ribonucleoprotein complex
HA [auth o]	MITORIBOSOMAL PROTEIN MS39, MRPS39	RNA binding binding rRNA binding nucleic acid binding ribonucleoprotein complex binding protein-containing complex binding ribosomal small subunit binding ribosome binding	regulation of biosynthetic process regulation of biological process regulation of cellular process regulation of protein metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process gene expression translation macromolecule biosynthetic process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression regulation of gene expression biosynthetic process regulation of biosynthetic process regulation of biological process regulation of cellular process regulation of protein metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process gene expression translation macromolecule biosynthetic process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression regulation of gene expression biosynthetic process regulation of translation regulation of macromolecule biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process regulation of metabolic process mitochondrial translation mitochondrial gene expression	membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope cellular anatomical structure organelle mitochondrial envelope cytoplasm membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope cellular anatomical structure organelle mitochondrial envelope cytoplasm organelle membrane protein-containing complex ribonucleoprotein complex membraneless organelle intracellular membraneless organelle ribosome
GA [auth n]	MITORIBOSOMAL PROTEIN MS38, MRPS38	-	-	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle
FA [auth m]	MITORIBOSOMAL PROTEIN MS37, MRPS37	-	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle mitochondrial ribosome intracellular anatomical structure mitochondrion membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle mitochondrial matrix intracellular organelle lumen intracellular organelle cellular anatomical structure organellar ribosome organelle lumen organelle membrane-bounded organelle mitochondrial ribosome intracellular anatomical structure mitochondrion membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle mitochondrial matrix intracellular organelle lumen intracellular organelle cellular anatomical structure organellar ribosome organelle lumen organelle membraneless organelle ribosome cytoplasm
EA [auth k]	MITORIBOSOMAL PROTEIN MS35, MRPS35	structural molecule activity structural constituent of ribosome	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle membraneless organelle intracellular membraneless organelle ribosome
C	MITORIBOSOMAL PROTEIN US3M, MRPS24	-	-	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex ribonucleoprotein complex membraneless organelle intracellular membraneless organelle ribosome
DA [auth j]	MITORIBOSOMAL PROTEIN MS34, MRPS34	-	-	-
CA [auth i]	MITORIBOSOMAL PROTEIN MS33, MRPS33	-	-	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex ribonucleoprotein complex membraneless organelle intracellular membraneless organelle ribosome
BA [auth h]	MITORIBOSOMAL PROTEIN MS31, MRPS31	structural molecule activity structural constituent of ribosome	-	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial small ribosomal subunit intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle organellar small ribosomal subunit membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial small ribosomal subunit intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle organellar small ribosomal subunit ribosome mitochondrial protein-containing complex mitochondrial ribosome small ribosomal subunit intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
AA [auth g]	MITORIBOSOMAL PROTEIN MS29, MRPS29	-	cellular process apoptotic process cell death programmed cell death	protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome membrane-bounded organelle mitochondrial ribosome mitochondrion protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome membrane-bounded organelle mitochondrial ribosome mitochondrion membrane-enclosed lumen intracellular membrane-bounded organelle mitochondrial matrix intracellular organelle lumen organellar ribosome organelle lumen cytoplasm
Z [auth f]	MITORIBOSOMAL PROTEIN MS28, MRPS28	-	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial small ribosomal subunit intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle organellar small ribosomal subunit membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial small ribosomal subunit intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle organellar small ribosomal subunit ribosome mitochondrial protein-containing complex mitochondrial ribosome small ribosomal subunit intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
Y [auth e]	MITORIBOSOMAL PROTEIN MS27, MRPS27	-	-	-
X [auth d]	MITORIBOSOMAL PROTEIN MS26, MRPS26	-	-	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure nucleoplasm organelle lumen organelle nuclear lumen protein-containing complex mitochondrion membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure nucleoplasm organelle lumen organelle nuclear lumen protein-containing complex mitochondrion mitochondrial matrix mitochondrial small ribosomal subunit ribosomal subunit organellar ribosome membraneless organelle organellar small ribosomal subunit ribosome mitochondrial protein-containing complex mitochondrial ribosome small ribosomal subunit intracellular membraneless organelle ribonucleoprotein complex cytoplasm
W [auth c]	MITORIBOSOMAL PROTEIN MS25, MRPS25	structural molecule activity structural constituent of ribosome	-	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane mitochondrial inner membrane organelle envelope mitochondrial envelope membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane mitochondrial inner membrane organelle envelope mitochondrial envelope organelle membrane protein-containing complex ribonucleoprotein complex membraneless organelle intracellular membraneless organelle ribosome
V [auth b]	MITORIBOSOMAL PROTEIN MS23, MRPS23	-	-	-
U [auth a]	MITORIBOSOMAL PROTEIN MS22, MRPS22	-	-	-
B	MITORIBOSOMAL PROTEIN US2M, MRPS2	structural molecule activity structural constituent of ribosome	ribonucleoprotein complex biogenesis organelle assembly membraneless organelle assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization cellular component assembly cellular process cellular component organization or biogenesis mitochondrial ribosome assembly ribosome assembly biosynthetic process metabolic process ribonucleoprotein complex biogenesis organelle assembly membraneless organelle assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization cellular component assembly cellular process cellular component organization or biogenesis mitochondrial ribosome assembly ribosome assembly biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope cellular anatomical structure organelle mitochondrial envelope cytoplasm membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope cellular anatomical structure organelle mitochondrial envelope cytoplasm organelle membrane protein-containing complex membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial small ribosomal subunit ribosomal subunit organellar ribosome membraneless organelle organellar small ribosomal subunit ribosome mitochondrial protein-containing complex mitochondrial ribosome small ribosomal subunit intracellular membraneless organelle organelle lumen ribonucleoprotein complex
S [auth X]	MRNA	-	-	-
R [auth V], T [auth Y]	P-SITE AND A-SITE TRNA	-	-	-
Q [auth U]	MITORIBOSOMAL PROTEIN BS21M, MRPS21	-	-	-
P [auth T]	MITORIBOSOMAL PROTEIN BL19M, MRPL19	-	-	-
O [auth R]	MITORIBOSOMAL PROTEIN BS18M, MRPS18C	RNA binding small ribosomal subunit rRNA binding binding rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope cellular anatomical structure organelle mitochondrial envelope cytoplasm membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope cellular anatomical structure organelle mitochondrial envelope cytoplasm organelle membrane protein-containing complex membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial small ribosomal subunit ribosomal subunit organellar ribosome membraneless organelle organellar small ribosomal subunit ribosome mitochondrial protein-containing complex mitochondrial ribosome small ribosomal subunit intracellular membraneless organelle organelle lumen ribonucleoprotein complex
N [auth Q]	MITORIBOSOMAL PROTEIN US17M, MRPS17	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope cellular anatomical structure organelle mitochondrial envelope cytoplasm membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope cellular anatomical structure organelle mitochondrial envelope cytoplasm organelle membrane protein-containing complex membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial small ribosomal subunit ribosomal subunit organellar ribosome membraneless organelle organellar small ribosomal subunit ribosome mitochondrial protein-containing complex mitochondrial ribosome small ribosomal subunit intracellular membraneless organelle organelle lumen ribonucleoprotein complex
M [auth P]	MITORIBOSOMAL PROTEIN BS16M, MRPS16	-	-	-
L [auth O]	MITORIBOSOMAL PROTEIN US15M, MRPS15	-	-	-
K [auth N]	MITORIBOSOMAL PROTEIN US14M, MRPS14	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex cellular anatomical structure intracellular anatomical structure cytoplasm intracellular organelle organelle membraneless organelle intracellular membraneless organelle ribosome
J [auth L]	MITORIBOSOMAL PROTEIN US12M, MRPS12	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial small ribosomal subunit intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle organellar small ribosomal subunit membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial small ribosomal subunit intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle organellar small ribosomal subunit ribosome mitochondrial protein-containing complex mitochondrial ribosome small ribosomal subunit intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
A	MITORIBOSOMAL 12S RRNA	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
H [auth J]	IPR027486	Small ribosomal subunit protein uS10 domain	Domain
H [auth J]	IPR040055	Small ribosomal subunit protein uS10m	Family
H [auth J]	IPR036838	Small ribosomal subunit protein uS10 domain superfamily	Homologous Superfamily
G [auth I]	IPR020574	Small ribosomal subunit protein uS9, conserved site	Conserved Site
G [auth I]	IPR020568	Ribosomal protein uS5 domain 2-type superfamily	Homologous Superfamily
G [auth I]	IPR000754	Small ribosomal subunit protein uS9	Family
G [auth I]	IPR014721	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Homologous Superfamily
D [auth E]	IPR000851	Small ribosomal subunit protein uS5	Family
D [auth E]	IPR048584	Small ribosomal subunit protein uS5m, N-terminal domain	Domain
D [auth E]	IPR005324	Small ribosomal subunit protein uS5, C-terminal	Domain
D [auth E]	IPR013810	Small ribosomal subunit protein uS5, N-terminal	Domain
D [auth E]	IPR020568	Ribosomal protein uS5 domain 2-type superfamily	Homologous Superfamily
D [auth E]	IPR018192	Small ribosomal subunit protein uS5, N-terminal, conserved site	Conserved Site
D [auth E]	IPR014721	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Homologous Superfamily
IA [auth p]	IPR040054	Small ribosomal subunit protein mS40	Family
IA [auth p]	IPR001648	Small ribosomal subunit protein bS18	Family
IA [auth p]	IPR036870	Small ribosomal subunit protein bS18 superfamily	Homologous Superfamily
HA [auth o]	IPR037387	Pentatricopeptide repeat domain-containing protein 3	Family
HA [auth o]	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
HA [auth o]	IPR055063	Small ribosomal subunit protein mS39, PPR	Repeat
HA [auth o]	IPR002885	Pentatricopeptide repeat	Repeat
GA [auth n]	IPR013177	Ribosomal protein bS22, C-terminal	Domain
FA [auth m]	IPR010625	CHCH	Domain
FA [auth m]	IPR009069	Cysteine alpha-hairpin motif superfamily	Homologous Superfamily
FA [auth m]	IPR033620	Small ribosomal subunit protein mS37, metazoan	Family
EA [auth k]	IPR039848	Small ribosomal subunit protein mS35, mitochondrial	Family
EA [auth k]	IPR019349	Small ribosomal subunit protein mS35, mitochondrial, conserved domain	Domain
C	IPR026146	Small ribosomal subunit protein uS3m, metazoan	Family
CA [auth i]	IPR013219	Small ribosomal subunit protein mS33	Family
BA [auth h]	IPR026299	Mitochondrial 28S ribosomal protein S31	Family
AA [auth g]	IPR008092	Small ribosomal subunit protein mS29, metazoa	Family
AA [auth g]	IPR019368	Small ribosomal subunit protein mS29	Family
AA [auth g]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
Z [auth f]	IPR019375	Small ribosomal subunit protein bS1m	Family
X [auth d]	IPR026140	Small ribosomal subunit protein mS26	Family
W [auth c]	IPR007741	Ribosomal protein/NADH dehydrogenase domain	Domain
W [auth c]	IPR036249	Thioredoxin-like superfamily	Homologous Superfamily
W [auth c]	IPR040049	Ribosomal subunit protein mS25/mL61, mitochondrial	Family
B	IPR005706	Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid	Family
B	IPR023591	Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily	Homologous Superfamily
B	IPR018130	Small ribosomal subunit protein uS2, conserved site	Conserved Site
B	IPR001865	Small ribosomal subunit protein uS2	Family
O [auth R]	IPR001648	Small ribosomal subunit protein bS18	Family
O [auth R]	IPR018275	Small ribosomal subunit protein bS18, conserved site	Conserved Site
O [auth R]	IPR036870	Small ribosomal subunit protein bS18 superfamily	Homologous Superfamily
N [auth Q]	IPR039193	Small ribosomal subunit protein uS17m, metazoa	Family
N [auth Q]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
N [auth Q]	IPR000266	Small ribosomal subunit protein uS17	Family
K [auth N]	IPR001209	Small ribosomal subunit protein uS14	Family
J [auth L]	IPR006032	Small ribosomal subunit protein uS12	Family
J [auth L]	IPR005679	Ribosomal protein uS12, bacteria	Family
J [auth L]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily