5A72 | pdb_00005a72

Crystal structure of the homing endonuclease I-CvuI in complex with its target (Sro1.3) in the presence of 2 mM Ca

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyHoming endonucleases 8060834 3000266 SCOP2B (2022-06-29)
ASCOP2 FamilyGroup I mobile intron endonuclease 8060833 4001698 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyHoming endonucleases 8060834 3000266 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BPkinase, Kdoe5a72B1 A: a/b three-layered sandwichesX: Cysteine proteinases-likeH: Piezo CTL2 domainT: Piezo CTL2 domainF: Pkinase, KdoECOD (v294.1)
APkinase, Kdoe5a72A1 A: a/b three-layered sandwichesX: Cysteine proteinases-likeH: Piezo CTL2 domainT: Piezo CTL2 domainF: Pkinase, KdoECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.10.28.10 Alpha Beta Roll Endonuclease I-creI Homing endonucleasesCATH (4.3.0)
A3.10.28.10 Alpha Beta Roll Endonuclease I-creI Homing endonucleasesCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C, D
24MER DNA, 5'-D(*DTP*CP*AP*GP*AP*AP*CP*GP*TP*CP*GP*TP*AP *DCP*GP*AP*CP*GP*TP*TP*CP*TP*GP*A)-3'---
A, B
DNA ENDONUCLEASE I-CVUI

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR004860Homing endonuclease, LAGLIDADG domainDomain
A, B
IPR027434Homing endonucleaseHomologous Superfamily