5A6E | pdb_00005a6e

Cryo-EM structure of the Slo2.2 Na-activated K channel


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Ce5a6eC1 A: C-terminal additional helical subdomain in reovirus polymerase lambda3X: C-terminal additional helical subdomain in reovirus polymerase lambda3H: C-terminal additional helical subdomain in reovirus polymerase lambda3T: HrpJF:ECOD (20:10:01)
Be5a6eB1 A: C-terminal additional helical subdomain in reovirus polymerase lambda3X: C-terminal additional helical subdomain in reovirus polymerase lambda3H: C-terminal additional helical subdomain in reovirus polymerase lambda3T: HrpJF:ECOD (20:10:01)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF03493Calcium-activated BK potassium channel alpha subunit (BK_channel_a)Calcium-activated BK potassium channel alpha subunit- Family
PF22614Calcium-activated potassium channel slowpoke-like RCK domain (Slo-like_RCK)Calcium-activated potassium channel slowpoke-like RCK domainThis entry includes calcium-activated potassium channels, known as BK channels or Slowpoke homologues (Slo1-3) which includes calcium-activated potassium channel slowpoke from Drosophila (Slo) and its homologues from vertebrates KCMA1, KCNT1/2 and KC ...This entry includes calcium-activated potassium channels, known as BK channels or Slowpoke homologues (Slo1-3) which includes calcium-activated potassium channel slowpoke from Drosophila (Slo) and its homologues from vertebrates KCMA1, KCNT1/2 and KCNU1. This entry represents the C-terminal regulator of K+ conductance (RCK) domains which appear as tandem domains in these proteins [1-5]. The RCK domain has a Rossmann-fold topology with unique positions that compose a well-conserved salt bridge and a hydrophobic dimer interface. This domain is also presents in prokaryotic K+ channels.
Domain
PF07885Ion channel (Ion_trans_2)Ion channel- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
RCK2 ELABORATION OF POTASSIUM CHANNEL SUBFAMILY T MEMBER 1---
GATING RING OF POTASSIUM CHANNEL SUBFAMILY T MEMBER 1
PORE DOMAIN OF POTASSIUM CHANNEL SUBFAMILY T MEMBER 1
S1-S4 DOMAIN OF POTASSIUM CHANNEL SUBFAMILY T MEMBER 1---