CRYSTAL STRUCTURE OF THE T1L REOVIRUS ATTACHMENT PROTEIN SIGMA1
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C | Flavin_Reduct | e4xc5C1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Glycosyl hydrolase domain | T: Glycosyl hydrolase domain | F: Flavin_Reduct | ECOD (v294.1) |
| B | Flavin_Reduct | e4xc5B1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Glycosyl hydrolase domain | T: Glycosyl hydrolase domain | F: Flavin_Reduct | ECOD (v294.1) |
| A | Flavin_Reduct | e4xc5A1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Glycosyl hydrolase domain | T: Glycosyl hydrolase domain | F: Flavin_Reduct | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| C | 2.60.90.20 | Mainly Beta | Sandwich | Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) | Virus attachment protein , globular domain | CATH (4.3.0) |
| B | 2.60.90.20 | Mainly Beta | Sandwich | Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) | Virus attachment protein , globular domain | CATH (4.3.0) |
| A | 2.60.90.20 | Mainly Beta | Sandwich | Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) | Virus attachment protein , globular domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF01664 | Reovirus viral attachment protein sigma 1 (Reo_sigma1) | Reovirus viral attachment protein sigma 1 | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Outer capsid protein sigma-1 | - |
|
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR002592 | Outer capsid protein sigma-1, C-terminal domain | Domain | |
| IPR008982 | Adenovirus pIV-like, attachment domain | Homologous Superfamily |














