4XC5

CRYSTAL STRUCTURE OF THE T1L REOVIRUS ATTACHMENT PROTEIN SIGMA1

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BReo_sigma1_Ce4xc5B1 A: beta sandwichesX: Domain in virus attachment proteins (From Topology)H: Domain in virus attachment proteins (From Topology)T: Domain in virus attachment proteinsF: Reo_sigma1_CECOD (1.6)
BReo_sigma1_Ne4xc5B2 A: beta duplicates or obligate multimersX: Triple beta-spiral (From Topology)H: Triple beta-spiral (From Topology)T: Triple beta-spiralF: Reo_sigma1_NECOD (1.6)
AReo_sigma1_Ce4xc5A2 A: beta sandwichesX: Domain in virus attachment proteins (From Topology)H: Domain in virus attachment proteins (From Topology)T: Domain in virus attachment proteinsF: Reo_sigma1_CECOD (1.6)
AReo_sigma1_Ne4xc5A1 A: beta duplicates or obligate multimersX: Triple beta-spiral (From Topology)H: Triple beta-spiral (From Topology)T: Triple beta-spiralF: Reo_sigma1_NECOD (1.6)
CReo_sigma1_Ce4xc5C1 A: beta sandwichesX: Domain in virus attachment proteins (From Topology)H: Domain in virus attachment proteins (From Topology)T: Domain in virus attachment proteinsF: Reo_sigma1_CECOD (1.6)
CReo_sigma1_Ne4xc5C2 A: beta duplicates or obligate multimersX: Triple beta-spiral (From Topology)H: Triple beta-spiral (From Topology)T: Triple beta-spiralF: Reo_sigma1_NECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.60.90.20 Mainly Beta Sandwich Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) Virus attachment protein , globular domainCATH (4.3.0)
A2.60.90.20 Mainly Beta Sandwich Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) Virus attachment protein , globular domainCATH (4.3.0)
C2.60.90.20 Mainly Beta Sandwich Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) Virus attachment protein , globular domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C
PF01664Reovirus viral attachment protein sigma 1 (Reo_sigma1)Reovirus viral attachment protein sigma 1- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C
Outer capsid protein sigma-1-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C
IPR008982Adenovirus pIV-like, attachment domainHomologous Superfamily
A, B, C
IPR002592Viral attachment sigma 1, reoviralFamily