4V98 | pdb_00004v98

The 8S snRNP Assembly Intermediate


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ZB [auth BV]SCOP2B SuperfamilySMN protein Gemin2-like 8092160 3002565 SCOP2B (2022-06-29)
XC [auth Bt]SCOP2B SuperfamilySMN protein Gemin2-like 8092160 3002565 SCOP2B (2022-06-29)
XA [auth A2]SCOP2B SuperfamilySMN protein Gemin2-like 8092160 3002565 SCOP2B (2022-06-29)
VD [auth CN]SCOP2B SuperfamilySMN protein Gemin2-like 8092160 3002565 SCOP2B (2022-06-29)
V [auth AV]SCOP2B SuperfamilySMN protein Gemin2-like 8092160 3002565 SCOP2B (2022-06-29)
TE [auth Cl]SCOP2B SuperfamilySMN protein Gemin2-like 8092160 3002565 SCOP2B (2022-06-29)
TA [auth At]SCOP2B SuperfamilySMN protein Gemin2-like 8092160 3002565 SCOP2B (2022-06-29)
RB [auth BN]SCOP2B SuperfamilySMN protein Gemin2-like 8092160 3002565 SCOP2B (2022-06-29)
PC [auth Bl]SCOP2 FamilySMN protein Gemin2 8046709 4005254 SCOP2 (2022-06-29)
PC [auth Bl]SCOP2 SuperfamilySMN protein Gemin2-like 8092160 3002565 SCOP2 (2022-06-29)
ND [auth CF]SCOP2B SuperfamilySMN protein Gemin2-like 8092160 3002565 SCOP2B (2022-06-29)
N [auth AF]SCOP2B SuperfamilySMN protein Gemin2-like 8092160 3002565 SCOP2B (2022-06-29)
LE [auth Cd]SCOP2B SuperfamilySMN protein Gemin2-like 8092160 3002565 SCOP2B (2022-06-29)
LA [auth Al]SCOP2B SuperfamilySMN protein Gemin2-like 8092160 3002565 SCOP2B (2022-06-29)
JB [auth BF]SCOP2B SuperfamilySMN protein Gemin2-like 8092160 3002565 SCOP2B (2022-06-29)
HC [auth Bd]SCOP2B SuperfamilySMN protein Gemin2-like 8092160 3002565 SCOP2B (2022-06-29)
F [auth AN]SCOP2B SuperfamilySMN protein Gemin2-like 8092160 3002565 SCOP2B (2022-06-29)
DE [auth CV]SCOP2B SuperfamilySMN protein Gemin2-like 8092160 3002565 SCOP2B (2022-06-29)
DA [auth Ad]SCOP2B SuperfamilySMN protein Gemin2-like 8092160 3002565 SCOP2B (2022-06-29)
BF [auth Ct]SCOP2B SuperfamilySMN protein Gemin2-like 8092160 3002565 SCOP2B (2022-06-29)
BD [auth B2]SCOP2B SuperfamilySMN protein Gemin2-like 8092160 3002565 SCOP2B (2022-06-29)
ZC [auth Bv]SCOP2B SuperfamilySm-like ribonucleoproteins 8063468 3000419 SCOP2B (2022-06-29)
ZA [auth A4]SCOP2B SuperfamilySm-like ribonucleoproteins 8063468 3000419 SCOP2B (2022-06-29)
XD [auth CP]SCOP2B SuperfamilySm-like ribonucleoproteins 8063468 3000419 SCOP2B (2022-06-29)
X [auth AX]SCOP2B SuperfamilySm-like ribonucleoproteins 8063468 3000419 SCOP2B (2022-06-29)
VE [auth Cn]SCOP2B SuperfamilySm-like ribonucleoproteins 8063468 3000419 SCOP2B (2022-06-29)
VA [auth Av]SCOP2B SuperfamilySm-like ribonucleoproteins 8063468 3000419 SCOP2B (2022-06-29)
TB [auth BP]SCOP2B SuperfamilySm-like ribonucleoproteins 8063468 3000419 SCOP2B (2022-06-29)
RC [auth Bn]SCOP2B SuperfamilySm-like ribonucleoproteins 8063468 3000419 SCOP2B (2022-06-29)
PD [auth CH]SCOP2B SuperfamilySm-like ribonucleoproteins 8063468 3000419 SCOP2B (2022-06-29)
P [auth AH]SCOP2B SuperfamilySm-like ribonucleoproteins 8063468 3000419 SCOP2B (2022-06-29)
NE [auth Cf]SCOP2B SuperfamilySm-like ribonucleoproteins 8063468 3000419 SCOP2B (2022-06-29)
NA [auth An]SCOP2B SuperfamilySm-like ribonucleoproteins 8063468 3000419 SCOP2B (2022-06-29)
LB [auth BH]SCOP2B SuperfamilySm-like ribonucleoproteins 8063468 3000419 SCOP2B (2022-06-29)
JC [auth Bf]SCOP2B SuperfamilySm-like ribonucleoproteins 8063468 3000419 SCOP2B (2022-06-29)
H [auth AP]SCOP2B SuperfamilySm-like ribonucleoproteins 8063468 3000419 SCOP2B (2022-06-29)
FE [auth CX]SCOP2B SuperfamilySm-like ribonucleoproteins 8063468 3000419 SCOP2B (2022-06-29)
FA [auth Af]SCOP2B SuperfamilySm-like ribonucleoproteins 8063468 3000419 SCOP2B (2022-06-29)
DF [auth Cv]SCOP2B SuperfamilySm-like ribonucleoproteins 8063468 3000419 SCOP2B (2022-06-29)
DD [auth B4]SCOP2B SuperfamilySm-like ribonucleoproteins 8063468 3000419 SCOP2B (2022-06-29)
BC [auth BX]SCOP2B SuperfamilySm-like ribonucleoproteins 8063468 3000419 SCOP2B (2022-06-29)
ZE [auth Cr]SCOP2B SuperfamilySm-like ribonucleoproteins 8063452 3000419 SCOP2B (2022-06-29)
XB [auth BT]SCOP2B SuperfamilySm-like ribonucleoproteins 8063452 3000419 SCOP2B (2022-06-29)
VC [auth Br]SCOP2B SuperfamilySm-like ribonucleoproteins 8063452 3000419 SCOP2B (2022-06-29)
TD [auth CL]SCOP2B SuperfamilySm-like ribonucleoproteins 8063452 3000419 SCOP2B (2022-06-29)
T [auth AT]SCOP2B SuperfamilySm-like ribonucleoproteins 8063452 3000419 SCOP2B (2022-06-29)
RE [auth Cj]SCOP2B SuperfamilySm-like ribonucleoproteins 8063452 3000419 SCOP2B (2022-06-29)
RA [auth Ar]SCOP2B SuperfamilySm-like ribonucleoproteins 8063452 3000419 SCOP2B (2022-06-29)
PB [auth BL]SCOP2B SuperfamilySm-like ribonucleoproteins 8063452 3000419 SCOP2B (2022-06-29)
NC [auth Bj]SCOP2B SuperfamilySm-like ribonucleoproteins 8063452 3000419 SCOP2B (2022-06-29)
LD [auth CD]SCOP2B SuperfamilySm-like ribonucleoproteins 8063452 3000419 SCOP2B (2022-06-29)
L [auth AD]SCOP2B SuperfamilySm-like ribonucleoproteins 8063452 3000419 SCOP2B (2022-06-29)
JE [auth Cb]SCOP2B SuperfamilySm-like ribonucleoproteins 8063452 3000419 SCOP2B (2022-06-29)
JA [auth Aj]SCOP2B SuperfamilySm-like ribonucleoproteins 8063452 3000419 SCOP2B (2022-06-29)
HD [auth Bz]SCOP2B SuperfamilySm-like ribonucleoproteins 8063452 3000419 SCOP2B (2022-06-29)
HB [auth BD]SCOP2B SuperfamilySm-like ribonucleoproteins 8063452 3000419 SCOP2B (2022-06-29)
FC [auth Bb]SCOP2B SuperfamilySm-like ribonucleoproteins 8063452 3000419 SCOP2B (2022-06-29)
DB [auth Az]SCOP2B SuperfamilySm-like ribonucleoproteins 8063452 3000419 SCOP2B (2022-06-29)
D [auth AL]SCOP2B SuperfamilySm-like ribonucleoproteins 8063452 3000419 SCOP2B (2022-06-29)
BE [auth CT]SCOP2B SuperfamilySm-like ribonucleoproteins 8063452 3000419 SCOP2B (2022-06-29)
BA [auth Ab]SCOP2B SuperfamilySm-like ribonucleoproteins 8063452 3000419 SCOP2B (2022-06-29)
YE [auth Cq]SCOP2B SuperfamilySm-like ribonucleoproteins 8063476 3000419 SCOP2B (2022-06-29)
WB [auth BS]SCOP2B SuperfamilySm-like ribonucleoproteins 8063476 3000419 SCOP2B (2022-06-29)
UC [auth Bq]SCOP2B SuperfamilySm-like ribonucleoproteins 8063476 3000419 SCOP2B (2022-06-29)
SD [auth CK]SCOP2B SuperfamilySm-like ribonucleoproteins 8063476 3000419 SCOP2B (2022-06-29)
S [auth AS]SCOP2B SuperfamilySm-like ribonucleoproteins 8063476 3000419 SCOP2B (2022-06-29)
QE [auth Ci]SCOP2B SuperfamilySm-like ribonucleoproteins 8063476 3000419 SCOP2B (2022-06-29)
QA [auth Aq]SCOP2B SuperfamilySm-like ribonucleoproteins 8063476 3000419 SCOP2B (2022-06-29)
OB [auth BK]SCOP2B SuperfamilySm-like ribonucleoproteins 8063476 3000419 SCOP2B (2022-06-29)
MC [auth Bi]SCOP2B SuperfamilySm-like ribonucleoproteins 8063476 3000419 SCOP2B (2022-06-29)
KD [auth CC]SCOP2B SuperfamilySm-like ribonucleoproteins 8063476 3000419 SCOP2B (2022-06-29)
K [auth AC]SCOP2B SuperfamilySm-like ribonucleoproteins 8063476 3000419 SCOP2B (2022-06-29)
IE [auth Ca]SCOP2B SuperfamilySm-like ribonucleoproteins 8063476 3000419 SCOP2B (2022-06-29)
IA [auth Ai]SCOP2B SuperfamilySm-like ribonucleoproteins 8063476 3000419 SCOP2B (2022-06-29)
GD [auth By]SCOP2B SuperfamilySm-like ribonucleoproteins 8063476 3000419 SCOP2B (2022-06-29)
GB [auth BC]SCOP2B SuperfamilySm-like ribonucleoproteins 8063476 3000419 SCOP2B (2022-06-29)
EC [auth Ba]SCOP2B SuperfamilySm-like ribonucleoproteins 8063476 3000419 SCOP2B (2022-06-29)
CB [auth Ay]SCOP2B SuperfamilySm-like ribonucleoproteins 8063476 3000419 SCOP2B (2022-06-29)
C [auth AK]SCOP2B SuperfamilySm-like ribonucleoproteins 8063476 3000419 SCOP2B (2022-06-29)
AE [auth CS]SCOP2B SuperfamilySm-like ribonucleoproteins 8063476 3000419 SCOP2B (2022-06-29)
AA [auth Aa]SCOP2B SuperfamilySm-like ribonucleoproteins 8063476 3000419 SCOP2B (2022-06-29)
ZD [auth CR]SCOP2B SuperfamilySm-like ribonucleoproteins 8041749 3000419 SCOP2B (2022-06-29)
Z [auth AZ]SCOP2B SuperfamilySm-like ribonucleoproteins 8041749 3000419 SCOP2B (2022-06-29)
XE [auth Cp]SCOP2B SuperfamilySm-like ribonucleoproteins 8041749 3000419 SCOP2B (2022-06-29)
VB [auth BR]SCOP2B SuperfamilySm-like ribonucleoproteins 8041749 3000419 SCOP2B (2022-06-29)
TC [auth Bp]SCOP2B SuperfamilySm-like ribonucleoproteins 8041749 3000419 SCOP2B (2022-06-29)
RD [auth CJ]SCOP2B SuperfamilySm-like ribonucleoproteins 8041749 3000419 SCOP2B (2022-06-29)
R [auth AR]SCOP2B SuperfamilySm-like ribonucleoproteins 8041749 3000419 SCOP2B (2022-06-29)
PE [auth Ch]SCOP2B SuperfamilySm-like ribonucleoproteins 8041749 3000419 SCOP2B (2022-06-29)
PA [auth Ap]SCOP2B SuperfamilySm-like ribonucleoproteins 8041749 3000419 SCOP2B (2022-06-29)
NB [auth BJ]SCOP2B SuperfamilySm-like ribonucleoproteins 8041749 3000419 SCOP2B (2022-06-29)
LC [auth Bh]SCOP2B SuperfamilySm-like ribonucleoproteins 8041749 3000419 SCOP2B (2022-06-29)
JD [auth CB]SCOP2B SuperfamilySm-like ribonucleoproteins 8041749 3000419 SCOP2B (2022-06-29)
J [auth AB]SCOP2B SuperfamilySm-like ribonucleoproteins 8041749 3000419 SCOP2B (2022-06-29)
HE [auth CZ]SCOP2B SuperfamilySm-like ribonucleoproteins 8041749 3000419 SCOP2B (2022-06-29)
HA [auth Ah]SCOP2B SuperfamilySm-like ribonucleoproteins 8041749 3000419 SCOP2B (2022-06-29)
FD [auth Bx]SCOP2B SuperfamilySm-like ribonucleoproteins 8041749 3000419 SCOP2B (2022-06-29)
FB [auth BB]SCOP2B SuperfamilySm-like ribonucleoproteins 8041749 3000419 SCOP2B (2022-06-29)
DC [auth BZ]SCOP2B SuperfamilySm-like ribonucleoproteins 8041749 3000419 SCOP2B (2022-06-29)
BB [auth Ax]SCOP2B SuperfamilySm-like ribonucleoproteins 8041749 3000419 SCOP2B (2022-06-29)
B [auth AJ]SCOP2B SuperfamilySm-like ribonucleoproteins 8041749 3000419 SCOP2B (2022-06-29)
YD [auth CQ]SCOP2B SuperfamilySm-like ribonucleoproteins 8041748 3000419 SCOP2B (2022-06-29)
Y [auth AY]SCOP2B SuperfamilySm-like ribonucleoproteins 8041748 3000419 SCOP2B (2022-06-29)
WE [auth Co]SCOP2B SuperfamilySm-like ribonucleoproteins 8041748 3000419 SCOP2B (2022-06-29)
UB [auth BQ]SCOP2B SuperfamilySm-like ribonucleoproteins 8041748 3000419 SCOP2B (2022-06-29)
SC [auth Bo]SCOP2B SuperfamilySm-like ribonucleoproteins 8041748 3000419 SCOP2B (2022-06-29)
QD [auth CI]SCOP2B SuperfamilySm-like ribonucleoproteins 8041748 3000419 SCOP2B (2022-06-29)
Q [auth AQ]SCOP2B SuperfamilySm-like ribonucleoproteins 8041748 3000419 SCOP2B (2022-06-29)
OE [auth Cg]SCOP2B SuperfamilySm-like ribonucleoproteins 8041748 3000419 SCOP2B (2022-06-29)
OA [auth Ao]SCOP2B SuperfamilySm-like ribonucleoproteins 8041748 3000419 SCOP2B (2022-06-29)
MB [auth BI]SCOP2B SuperfamilySm-like ribonucleoproteins 8041748 3000419 SCOP2B (2022-06-29)
KC [auth Bg]SCOP2B SuperfamilySm-like ribonucleoproteins 8041748 3000419 SCOP2B (2022-06-29)
ID [auth CA]SCOP2B SuperfamilySm-like ribonucleoproteins 8041748 3000419 SCOP2B (2022-06-29)
I [auth AA]SCOP2B SuperfamilySm-like ribonucleoproteins 8041748 3000419 SCOP2B (2022-06-29)
GE [auth CY]SCOP2B SuperfamilySm-like ribonucleoproteins 8041748 3000419 SCOP2B (2022-06-29)
GA [auth Ag]SCOP2B SuperfamilySm-like ribonucleoproteins 8041748 3000419 SCOP2B (2022-06-29)
ED [auth Bw]SCOP2B SuperfamilySm-like ribonucleoproteins 8041748 3000419 SCOP2B (2022-06-29)
EB [auth BA]SCOP2B SuperfamilySm-like ribonucleoproteins 8041748 3000419 SCOP2B (2022-06-29)
CC [auth BY]SCOP2B SuperfamilySm-like ribonucleoproteins 8041748 3000419 SCOP2B (2022-06-29)
AB [auth Aw]SCOP2B SuperfamilySm-like ribonucleoproteins 8041748 3000419 SCOP2B (2022-06-29)
A [auth AI]SCOP2B SuperfamilySm-like ribonucleoproteins 8041748 3000419 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ZB [auth BV]SIP1e4v98BV1 A: alpha superhelicesX: Repetitive alpha hairpinsH: Survival of motor neuron protein-interacting protein 1 (From Topology)T: Survival of motor neuron protein-interacting protein 1F: SIP1ECOD (1.6)
XC [auth Bt]SIP1e4v98Bt1 A: alpha superhelicesX: Repetitive alpha hairpinsH: Survival of motor neuron protein-interacting protein 1 (From Topology)T: Survival of motor neuron protein-interacting protein 1F: SIP1ECOD (1.6)
XA [auth A2]SIP1e4v98A21 A: alpha superhelicesX: Repetitive alpha hairpinsH: Survival of motor neuron protein-interacting protein 1 (From Topology)T: Survival of motor neuron protein-interacting protein 1F: SIP1ECOD (1.6)
VD [auth CN]SIP1e4v98CN1 A: alpha superhelicesX: Repetitive alpha hairpinsH: Survival of motor neuron protein-interacting protein 1 (From Topology)T: Survival of motor neuron protein-interacting protein 1F: SIP1ECOD (1.6)
V [auth AV]SIP1e4v98AV1 A: alpha superhelicesX: Repetitive alpha hairpinsH: Survival of motor neuron protein-interacting protein 1 (From Topology)T: Survival of motor neuron protein-interacting protein 1F: SIP1ECOD (1.6)
TE [auth Cl]SIP1e4v98Cl1 A: alpha superhelicesX: Repetitive alpha hairpinsH: Survival of motor neuron protein-interacting protein 1 (From Topology)T: Survival of motor neuron protein-interacting protein 1F: SIP1ECOD (1.6)
TA [auth At]SIP1e4v98At1 A: alpha superhelicesX: Repetitive alpha hairpinsH: Survival of motor neuron protein-interacting protein 1 (From Topology)T: Survival of motor neuron protein-interacting protein 1F: SIP1ECOD (1.6)
RB [auth BN]SIP1e4v98BN1 A: alpha superhelicesX: Repetitive alpha hairpinsH: Survival of motor neuron protein-interacting protein 1 (From Topology)T: Survival of motor neuron protein-interacting protein 1F: SIP1ECOD (1.6)
PC [auth Bl]SIP1e4v98Bl1 A: alpha superhelicesX: Repetitive alpha hairpinsH: Survival of motor neuron protein-interacting protein 1 (From Topology)T: Survival of motor neuron protein-interacting protein 1F: SIP1ECOD (1.6)
ND [auth CF]SIP1e4v98CF1 A: alpha superhelicesX: Repetitive alpha hairpinsH: Survival of motor neuron protein-interacting protein 1 (From Topology)T: Survival of motor neuron protein-interacting protein 1F: SIP1ECOD (1.6)
N [auth AF]SIP1e4v98AF1 A: alpha superhelicesX: Repetitive alpha hairpinsH: Survival of motor neuron protein-interacting protein 1 (From Topology)T: Survival of motor neuron protein-interacting protein 1F: SIP1ECOD (1.6)
LE [auth Cd]SIP1e4v98Cd1 A: alpha superhelicesX: Repetitive alpha hairpinsH: Survival of motor neuron protein-interacting protein 1 (From Topology)T: Survival of motor neuron protein-interacting protein 1F: SIP1ECOD (1.6)
LA [auth Al]SIP1e4v98Al1 A: alpha superhelicesX: Repetitive alpha hairpinsH: Survival of motor neuron protein-interacting protein 1 (From Topology)T: Survival of motor neuron protein-interacting protein 1F: SIP1ECOD (1.6)
JB [auth BF]SIP1e4v98BF1 A: alpha superhelicesX: Repetitive alpha hairpinsH: Survival of motor neuron protein-interacting protein 1 (From Topology)T: Survival of motor neuron protein-interacting protein 1F: SIP1ECOD (1.6)
HC [auth Bd]SIP1e4v98Bd1 A: alpha superhelicesX: Repetitive alpha hairpinsH: Survival of motor neuron protein-interacting protein 1 (From Topology)T: Survival of motor neuron protein-interacting protein 1F: SIP1ECOD (1.6)
F [auth AN]SIP1e4v98AN1 A: alpha superhelicesX: Repetitive alpha hairpinsH: Survival of motor neuron protein-interacting protein 1 (From Topology)T: Survival of motor neuron protein-interacting protein 1F: SIP1ECOD (1.6)
DE [auth CV]SIP1e4v98CV1 A: alpha superhelicesX: Repetitive alpha hairpinsH: Survival of motor neuron protein-interacting protein 1 (From Topology)T: Survival of motor neuron protein-interacting protein 1F: SIP1ECOD (1.6)
DA [auth Ad]SIP1e4v98Ad1 A: alpha superhelicesX: Repetitive alpha hairpinsH: Survival of motor neuron protein-interacting protein 1 (From Topology)T: Survival of motor neuron protein-interacting protein 1F: SIP1ECOD (1.6)
BF [auth Ct]SIP1e4v98Ct1 A: alpha superhelicesX: Repetitive alpha hairpinsH: Survival of motor neuron protein-interacting protein 1 (From Topology)T: Survival of motor neuron protein-interacting protein 1F: SIP1ECOD (1.6)
BD [auth B2]SIP1e4v98B21 A: alpha superhelicesX: Repetitive alpha hairpinsH: Survival of motor neuron protein-interacting protein 1 (From Topology)T: Survival of motor neuron protein-interacting protein 1F: SIP1ECOD (1.6)
YC [auth Bu]Voldacse4v98Bu1 A: beta barrelsX: PH domain-likeH: PH domain-like (From Topology)T: PH domain-likeF: VoldacsECOD (1.6)
YA [auth A3]Voldacse4v98A31 A: beta barrelsX: PH domain-likeH: PH domain-like (From Topology)T: PH domain-likeF: VoldacsECOD (1.6)
WD [auth CO]Voldacse4v98CO1 A: beta barrelsX: PH domain-likeH: PH domain-like (From Topology)T: PH domain-likeF: VoldacsECOD (1.6)
W [auth AW]Voldacse4v98AW1 A: beta barrelsX: PH domain-likeH: PH domain-like (From Topology)T: PH domain-likeF: VoldacsECOD (1.6)
UE [auth Cm]Voldacse4v98Cm1 A: beta barrelsX: PH domain-likeH: PH domain-like (From Topology)T: PH domain-likeF: VoldacsECOD (1.6)
UA [auth Au]Voldacse4v98Au1 A: beta barrelsX: PH domain-likeH: PH domain-like (From Topology)T: PH domain-likeF: VoldacsECOD (1.6)
SB [auth BO]Voldacse4v98BO1 A: beta barrelsX: PH domain-likeH: PH domain-like (From Topology)T: PH domain-likeF: VoldacsECOD (1.6)
QC [auth Bm]Voldacse4v98Bm1 A: beta barrelsX: PH domain-likeH: PH domain-like (From Topology)T: PH domain-likeF: VoldacsECOD (1.6)
OD [auth CG]Voldacse4v98CG1 A: beta barrelsX: PH domain-likeH: PH domain-like (From Topology)T: PH domain-likeF: VoldacsECOD (1.6)
O [auth AG]Voldacse4v98AG1 A: beta barrelsX: PH domain-likeH: PH domain-like (From Topology)T: PH domain-likeF: VoldacsECOD (1.6)
ME [auth Ce]Voldacse4v98Ce1 A: beta barrelsX: PH domain-likeH: PH domain-like (From Topology)T: PH domain-likeF: VoldacsECOD (1.6)
MA [auth Am]Voldacse4v98Am1 A: beta barrelsX: PH domain-likeH: PH domain-like (From Topology)T: PH domain-likeF: VoldacsECOD (1.6)
KB [auth BG]Voldacse4v98BG1 A: beta barrelsX: PH domain-likeH: PH domain-like (From Topology)T: PH domain-likeF: VoldacsECOD (1.6)
IC [auth Be]Voldacse4v98Be1 A: beta barrelsX: PH domain-likeH: PH domain-like (From Topology)T: PH domain-likeF: VoldacsECOD (1.6)
G [auth AO]Voldacse4v98AO1 A: beta barrelsX: PH domain-likeH: PH domain-like (From Topology)T: PH domain-likeF: VoldacsECOD (1.6)
EE [auth CW]Voldacse4v98CW1 A: beta barrelsX: PH domain-likeH: PH domain-like (From Topology)T: PH domain-likeF: VoldacsECOD (1.6)
EA [auth Ae]Voldacse4v98Ae1 A: beta barrelsX: PH domain-likeH: PH domain-like (From Topology)T: PH domain-likeF: VoldacsECOD (1.6)
CF [auth Cu]Voldacse4v98Cu1 A: beta barrelsX: PH domain-likeH: PH domain-like (From Topology)T: PH domain-likeF: VoldacsECOD (1.6)
CD [auth B3]Voldacse4v98B31 A: beta barrelsX: PH domain-likeH: PH domain-like (From Topology)T: PH domain-likeF: VoldacsECOD (1.6)
AC [auth BW]Voldacse4v98BW1 A: beta barrelsX: PH domain-likeH: PH domain-like (From Topology)T: PH domain-likeF: VoldacsECOD (1.6)
ZC [auth Bv]LSMe4v98Bv1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
ZA [auth A4]LSMe4v98A41 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
XD [auth CP]LSMe4v98CP1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
X [auth AX]LSMe4v98AX1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
VE [auth Cn]LSMe4v98Cn1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
VA [auth Av]LSMe4v98Av1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
TB [auth BP]LSMe4v98BP1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
RC [auth Bn]LSMe4v98Bn1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
PD [auth CH]LSMe4v98CH1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
P [auth AH]LSMe4v98AH1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
NE [auth Cf]LSMe4v98Cf1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
NA [auth An]LSMe4v98An1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
LB [auth BH]LSMe4v98BH1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
JC [auth Bf]LSMe4v98Bf1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
H [auth AP]LSMe4v98AP1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
FE [auth CX]LSMe4v98CX1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
FA [auth Af]LSMe4v98Af1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
DF [auth Cv]LSMe4v98Cv1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
DD [auth B4]LSMe4v98B41 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
BC [auth BX]LSMe4v98BX1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
ZE [auth Cr]LSMe4v98Cr1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
XB [auth BT]LSMe4v98BT1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
VC [auth Br]LSMe4v98Br1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
TD [auth CL]LSMe4v98CL1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
T [auth AT]LSMe4v98AT1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
RE [auth Cj]LSMe4v98Cj1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
RA [auth Ar]LSMe4v98Ar1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
PB [auth BL]LSMe4v98BL1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
NC [auth Bj]LSMe4v98Bj1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
LD [auth CD]LSMe4v98CD1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
L [auth AD]LSMe4v98AD1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
JE [auth Cb]LSMe4v98Cb1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
JA [auth Aj]LSMe4v98Aj1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
HD [auth Bz]LSMe4v98Bz1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
HB [auth BD]LSMe4v98BD1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
FC [auth Bb]LSMe4v98Bb1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
DB [auth Az]LSMe4v98Az1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
D [auth AL]LSMe4v98AL1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
BE [auth CT]LSMe4v98CT1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
BA [auth Ab]LSMe4v98Ab1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
YE [auth Cq]LSMe4v98Cq1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
WB [auth BS]LSMe4v98BS1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
UC [auth Bq]LSMe4v98Bq1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
SD [auth CK]LSMe4v98CK1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
S [auth AS]LSMe4v98AS1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
QE [auth Ci]LSMe4v98Ci1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
QA [auth Aq]LSMe4v98Aq1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
OB [auth BK]LSMe4v98BK1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
MC [auth Bi]LSMe4v98Bi1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
KD [auth CC]LSMe4v98CC1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
K [auth AC]LSMe4v98AC1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
IE [auth Ca]LSMe4v98Ca1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
IA [auth Ai]LSMe4v98Ai1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
GD [auth By]LSMe4v98By1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
GB [auth BC]LSMe4v98BC1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
EC [auth Ba]LSMe4v98Ba1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
CB [auth Ay]LSMe4v98Ay1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
C [auth AK]LSMe4v98AK1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
AE [auth CS]LSMe4v98CS1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
AA [auth Aa]LSMe4v98Aa1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
ZD [auth CR]LSMe4v98CR1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
Z [auth AZ]LSMe4v98AZ1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
XE [auth Cp]LSMe4v98Cp1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
VB [auth BR]LSMe4v98BR1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
TC [auth Bp]LSMe4v98Bp1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
RD [auth CJ]LSMe4v98CJ1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
R [auth AR]LSMe4v98AR1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
PE [auth Ch]LSMe4v98Ch1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
PA [auth Ap]LSMe4v98Ap1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
NB [auth BJ]LSMe4v98BJ1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
LC [auth Bh]LSMe4v98Bh1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
JD [auth CB]LSMe4v98CB1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
J [auth AB]LSMe4v98AB1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
HE [auth CZ]LSMe4v98CZ1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
HA [auth Ah]LSMe4v98Ah1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
FD [auth Bx]LSMe4v98Bx1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
FB [auth BB]LSMe4v98BB1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
DC [auth BZ]LSMe4v98BZ1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
BB [auth Ax]LSMe4v98Ax1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
B [auth AJ]LSMe4v98AJ1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
YD [auth CQ]LSMe4v98CQ1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
Y [auth AY]LSMe4v98AY1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
WE [auth Co]LSMe4v98Co1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
UB [auth BQ]LSMe4v98BQ1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
SC [auth Bo]LSMe4v98Bo1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
QD [auth CI]LSMe4v98CI1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
Q [auth AQ]LSMe4v98AQ1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
OE [auth Cg]LSMe4v98Cg1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
OA [auth Ao]LSMe4v98Ao1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
MB [auth BI]LSMe4v98BI1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
KC [auth Bg]LSMe4v98Bg1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
ID [auth CA]LSMe4v98CA1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
I [auth AA]LSMe4v98AA1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
GE [auth CY]LSMe4v98CY1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
GA [auth Ag]LSMe4v98Ag1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
ED [auth Bw]LSMe4v98Bw1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
EB [auth BA]LSMe4v98BA1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
CC [auth BY]LSMe4v98BY1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
AB [auth Aw]LSMe4v98Aw1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)
A [auth AI]LSMe4v98AI1 A: beta barrelsX: SH3H: SH3T: SH3F: LSMECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF03517Regulator of volume decrease after cellular swelling (Voldacs)Regulator of volume decrease after cellular swellingICln is a ubiquitously expressed multi-functional protein that plays a critical role in regulating volume decrease in cells after cellular swelling. In plants, ICln induces Cl- currents [1,4,5], thus regulating Cl- homoeostasis in eukaryotes [2,3]. S ...ICln is a ubiquitously expressed multi-functional protein that plays a critical role in regulating volume decrease in cells after cellular swelling. In plants, ICln induces Cl- currents [1,4,5], thus regulating Cl- homoeostasis in eukaryotes [2,3]. Structurally, the fold resembles a pleckstrin homology fold, on of whose roles is to recruit and tether their host protein to the cell membrane; and although the surface charges of the ICln fold are not equivalent to those of the PH domain, ICln can be phosphorylated in vitro and the PH-nature of the domain may be the part involving it in the transposition from cytosol to cell membrane during cytotonic swelling [1].
Domain
PF01423LSM domain (LSM)LSM domainThe LSM domain contains Sm proteins as well as other related LSM (Like Sm) proteins. The U1, U2, U4/U6, and U5 small nuclear ribonucleoprotein particles (snRNPs) involved in pre-mRNA splicing contain seven Sm proteins (B/B', D1, D2, D3, E, F and G) i ...The LSM domain contains Sm proteins as well as other related LSM (Like Sm) proteins. The U1, U2, U4/U6, and U5 small nuclear ribonucleoprotein particles (snRNPs) involved in pre-mRNA splicing contain seven Sm proteins (B/B', D1, D2, D3, E, F and G) in common, which assemble around the Sm site present in four of the major spliceosomal small nuclear RNAs. The U6 snRNP binds to the LSM (Like Sm) proteins [3]. Sm proteins are also found in archaebacteria, which do not have any splicing apparatus suggesting a more general role for Sm proteins. All Sm proteins contain a common sequence motif in two segments, Sm1 and Sm2, separated by a short variable linker. This family also includes the bacterial Hfq (host factor Q) proteins. Hfq are also RNA-binding proteins, that form hexameric rings.
Domain
PF01423LSM domain (LSM)LSM domainThe LSM domain contains Sm proteins as well as other related LSM (Like Sm) proteins. The U1, U2, U4/U6, and U5 small nuclear ribonucleoprotein particles (snRNPs) involved in pre-mRNA splicing contain seven Sm proteins (B/B', D1, D2, D3, E, F and G) i ...The LSM domain contains Sm proteins as well as other related LSM (Like Sm) proteins. The U1, U2, U4/U6, and U5 small nuclear ribonucleoprotein particles (snRNPs) involved in pre-mRNA splicing contain seven Sm proteins (B/B', D1, D2, D3, E, F and G) in common, which assemble around the Sm site present in four of the major spliceosomal small nuclear RNAs. The U6 snRNP binds to the LSM (Like Sm) proteins [3]. Sm proteins are also found in archaebacteria, which do not have any splicing apparatus suggesting a more general role for Sm proteins. All Sm proteins contain a common sequence motif in two segments, Sm1 and Sm2, separated by a short variable linker. This family also includes the bacterial Hfq (host factor Q) proteins. Hfq are also RNA-binding proteins, that form hexameric rings.
Domain
PF01423LSM domain (LSM)LSM domainThe LSM domain contains Sm proteins as well as other related LSM (Like Sm) proteins. The U1, U2, U4/U6, and U5 small nuclear ribonucleoprotein particles (snRNPs) involved in pre-mRNA splicing contain seven Sm proteins (B/B', D1, D2, D3, E, F and G) i ...The LSM domain contains Sm proteins as well as other related LSM (Like Sm) proteins. The U1, U2, U4/U6, and U5 small nuclear ribonucleoprotein particles (snRNPs) involved in pre-mRNA splicing contain seven Sm proteins (B/B', D1, D2, D3, E, F and G) in common, which assemble around the Sm site present in four of the major spliceosomal small nuclear RNAs. The U6 snRNP binds to the LSM (Like Sm) proteins [3]. Sm proteins are also found in archaebacteria, which do not have any splicing apparatus suggesting a more general role for Sm proteins. All Sm proteins contain a common sequence motif in two segments, Sm1 and Sm2, separated by a short variable linker. This family also includes the bacterial Hfq (host factor Q) proteins. Hfq are also RNA-binding proteins, that form hexameric rings.
Domain
PF01423LSM domain (LSM)LSM domainThe LSM domain contains Sm proteins as well as other related LSM (Like Sm) proteins. The U1, U2, U4/U6, and U5 small nuclear ribonucleoprotein particles (snRNPs) involved in pre-mRNA splicing contain seven Sm proteins (B/B', D1, D2, D3, E, F and G) i ...The LSM domain contains Sm proteins as well as other related LSM (Like Sm) proteins. The U1, U2, U4/U6, and U5 small nuclear ribonucleoprotein particles (snRNPs) involved in pre-mRNA splicing contain seven Sm proteins (B/B', D1, D2, D3, E, F and G) in common, which assemble around the Sm site present in four of the major spliceosomal small nuclear RNAs. The U6 snRNP binds to the LSM (Like Sm) proteins [3]. Sm proteins are also found in archaebacteria, which do not have any splicing apparatus suggesting a more general role for Sm proteins. All Sm proteins contain a common sequence motif in two segments, Sm1 and Sm2, separated by a short variable linker. This family also includes the bacterial Hfq (host factor Q) proteins. Hfq are also RNA-binding proteins, that form hexameric rings.
Domain
PF01423LSM domain (LSM)LSM domainThe LSM domain contains Sm proteins as well as other related LSM (Like Sm) proteins. The U1, U2, U4/U6, and U5 small nuclear ribonucleoprotein particles (snRNPs) involved in pre-mRNA splicing contain seven Sm proteins (B/B', D1, D2, D3, E, F and G) i ...The LSM domain contains Sm proteins as well as other related LSM (Like Sm) proteins. The U1, U2, U4/U6, and U5 small nuclear ribonucleoprotein particles (snRNPs) involved in pre-mRNA splicing contain seven Sm proteins (B/B', D1, D2, D3, E, F and G) in common, which assemble around the Sm site present in four of the major spliceosomal small nuclear RNAs. The U6 snRNP binds to the LSM (Like Sm) proteins [3]. Sm proteins are also found in archaebacteria, which do not have any splicing apparatus suggesting a more general role for Sm proteins. All Sm proteins contain a common sequence motif in two segments, Sm1 and Sm2, separated by a short variable linker. This family also includes the bacterial Hfq (host factor Q) proteins. Hfq are also RNA-binding proteins, that form hexameric rings.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
LD23602p
CG10419-
Icln-
Small nuclear ribonucleoprotein G
Small nuclear ribonucleoprotein F
Small nuclear ribonucleoprotein E
Small nuclear ribonucleoprotein Sm D2
Small nuclear ribonucleoprotein Sm D1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR002999Tudor domainDomain
IPR047313Survival motor neuron protein, C-terminal oligomerization domainDomain
IPR049481Survival Motor Neuron, Gemin2-binding domainDomain
IPR010304Survival motor neuron, Tudor domainDomain
IPR047298Survival motor neuron protein, Tudor domain, eumetazoaDomain
IPR040424SMN complex subunit Smn1Family
IPR017364Gem-associated protein 2Family
IPR035426Gemin2/Brr1Family
IPR039924Protein ICln/Lot5/Saf5Family
IPR011993PH-like domain superfamilyHomologous Superfamily
IPR003521IClnFamily
IPR044641Sm-like protein Lsm7/SmGFamily
IPR034098Small nuclear ribonucleoprotein GFamily
IPR001163Sm domain, eukaryotic/archaea-typeDomain
IPR047575Sm domainDomain
IPR010920LSM domain superfamilyHomologous Superfamily
IPR016487Sm-like protein Lsm6/SmFFamily
IPR034100Small nuclear ribonucleoprotein FFamily
IPR001163Sm domain, eukaryotic/archaea-typeDomain
IPR047575Sm domainDomain
IPR010920LSM domain superfamilyHomologous Superfamily
IPR027078Small nuclear ribonucleoprotein EFamily
IPR001163Sm domain, eukaryotic/archaea-typeDomain
IPR047575Sm domainDomain
IPR010920LSM domain superfamilyHomologous Superfamily
IPR001163Sm domain, eukaryotic/archaea-typeDomain
IPR047575Sm domainDomain
IPR027248Small nuclear ribonucleoprotein Sm D2Family
IPR010920LSM domain superfamilyHomologous Superfamily
IPR027141Like-Sm (LSM) domain containing protein, LSm4/SmD1/SmD3Family
IPR034102Small nuclear ribonucleoprotein D1Domain
IPR001163Sm domain, eukaryotic/archaea-typeDomain
IPR047575Sm domainDomain
IPR010920LSM domain superfamilyHomologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
PharosP62308
PharosP62306
PharosP62304
PharosP62316
PharosP62314