4V4B
Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map.
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
J [auth AJ] | SCOP2B Superfamily | Ribosomal protein S10 | 8098648 | 3001336 | SCOP2B (2022-06-29) |
K [auth AK] | SCOP2B Superfamily | Translational machinery components | 8095805 | 3000571 | SCOP2B (2022-06-29) |
N [auth AN] | SCOP2 Family | Ribosomal protein S14p/S29e | 8047591 | 4003647 | SCOP2 (2022-06-29) |
N [auth AN] | SCOP2 Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8052597 | 3000068 | SCOP2 (2022-06-29) |
Q [auth AS] | SCOP2 Family | Ribosomal protein S19 | 8086075 | 4001081 | SCOP2 (2022-06-29) |
Q [auth AS] | SCOP2 Superfamily | Ribosomal protein S19 | 8086076 | 3000686 | SCOP2 (2022-06-29) |
B [auth AT] | SCOP2B Superfamily | Ribosomal protein S5 domain 2-like | 8043947 | 3000100 | SCOP2B (2022-06-29) |
B [auth AT] | SCOP2B Superfamily | EF-G C-terminal domain-like | 8043948 | 3001287 | SCOP2B (2022-06-29) |
B [auth AT] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8043945 | 3002022 | SCOP2B (2022-06-29) |
B [auth AT] | SCOP2B Superfamily | EF-Tu post-G domain-like | 8043943 | 3002024 | SCOP2B (2022-06-29) |
B [auth AT] | SCOP2B Superfamily | EF-G C-terminal domain-like | 8043949 | 3001287 | SCOP2B (2022-06-29) |
V [auth BC] | SCOP2 Family | Ribosomal protein L3 | 8078362 | 4002103 | SCOP2 (2022-06-29) |
V [auth BC] | SCOP2 Superfamily | Translational proteins | 8078363 | 3000811 | SCOP2 (2022-06-29) |
Y [auth BF] | SCOP2B Superfamily | Ribosomal protein L30p/L7e | 8052917 | 3001378 | SCOP2B (2022-06-29) |
Z [auth BG] | SCOP2 Family | L30e/L7ae ribosomal proteins | 8063961 | 4001513 | SCOP2 (2022-06-29) |
Z [auth BG] | SCOP2 Superfamily | L30e-like | 8063962 | 3001739 | SCOP2 (2022-06-29) |
BA [auth BI] | SCOP2B Superfamily | Ribosomal protein L16p/L10e | 8079407 | 3000884 | SCOP2B (2022-06-29) |
C [auth AB] | SCOP2B Superfamily | SIS domain/Ribosomal protein S2-like | 8061280 | 3001397 | SCOP2B (2022-06-29) |
EA [auth BL] | SCOP2B Superfamily | Ribosomal proteins S24e L23 and L15e | 8082481 | 3000210 | SCOP2B (2022-06-29) |
FA [auth BM] | SCOP2 Family | Ribosomal protein L13 | 8066052 | 4003623 | SCOP2 (2022-06-29) |
FA [auth BM] | SCOP2 Superfamily | Ribosomal protein L13 | 8066053 | 3001134 | SCOP2 (2022-06-29) |
GA [auth BN] | SCOP2 Family | Ribosomal protein L22 | 8076707 | 4001212 | SCOP2 (2022-06-29) |
GA [auth BN] | SCOP2 Superfamily | Ribosomal protein L22 | 8076708 | 3001078 | SCOP2 (2022-06-29) |
MA [auth BT] | SCOP2B Superfamily | Ribosomal proteins S24e L23 and L15e | 8095962 | 3000210 | SCOP2B (2022-06-29) |
NA [auth BU] | SCOP2B Superfamily | Translation proteins SH3-like KOW motif containing domain | 8076760 | 3000334 | SCOP2B (2022-06-29) |
OA [auth BV] | SCOP2 Family | Ribosomal proteins L15p and L18e | 8077126 | 4003555 | SCOP2 (2022-06-29) |
OA [auth BV] | SCOP2 Superfamily | Ribosomal proteins L15p and L18e | 8077127 | 3001045 | SCOP2 (2022-06-29) |
SA [auth BY] | SCOP2 Family | Ribosomal protein L37e | 8080043 | 4003706 | SCOP2 (2022-06-29) |
SA [auth BY] | SCOP2 Superfamily | Zn-binding ribosomal proteins | 8080044 | 3001320 | SCOP2 (2022-06-29) |
G [auth AG] | SCOP2B Superfamily | Ribosomal protein S7 | 8065993 | 3000799 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
LA [auth BS] | PF01246 | e4v4bBS1 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: PF01246 | ECOD (1.6) |
J [auth AJ] | PF00338 | e4v4bAJ1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal protein S10 (From Topology) | T: Ribosomal protein S10 | F: PF00338 | ECOD (1.6) |
K [auth AK] | PF00411 | e4v4bAK1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00411 | ECOD (1.6) |
L [auth AL] | PF00164 | e4v4bAL1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: PF00164 | ECOD (1.6) |
M [auth AM] | PF00416 | e4v4bAM1 | A: alpha arrays | X: HhH/H2TH | H: H2TH (From Topology) | T: H2TH | F: PF00416 | ECOD (1.6) |
N [auth AN] | PF00253 | e4v4bAN1 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: PF00253 | ECOD (1.6) |
O [auth AO] | PF00312 | e4v4bAO1 | A: alpha arrays | X: S15/NS1 RNA-binding domain (From Topology) | H: S15/NS1 RNA-binding domain (From Topology) | T: S15/NS1 RNA-binding domain | F: PF00312 | ECOD (1.6) |
P [auth AQ] | PF00366 | e4v4bAQ1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: PF00366 | ECOD (1.6) |
Q [auth AS] | PF00203 | e4v4bAS1 | A: a+b two layers | X: Ribosomal protein S19 (From Topology) | H: Ribosomal protein S19 (From Topology) | T: Ribosomal protein S19 | F: PF00203 | ECOD (1.6) |
B [auth AT] | PF03144 | e4v4bAT2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: PF03144 | ECOD (1.6) |
B [auth AT] | PF03764 | e4v4bAT4 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: PF03764 | ECOD (1.6) |
B [auth AT] | PF00679 | e4v4bAT3 | A: a+b two layers | X: Alpha-beta plaits | H: EF-G C-terminal domain-like (From Topology) | T: EF-G C-terminal domain-like | F: PF00679 | ECOD (1.6) |
B [auth AT] | PF14492 | e4v4bAT1 | A: a+b two layers | X: Alpha-beta plaits | H: EF-G C-terminal domain-like (From Topology) | T: EF-G C-terminal domain-like | F: PF14492 | ECOD (1.6) |
B [auth AT] | PF00009 | e4v4bAT5 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00009 | ECOD (1.6) |
T [auth BA] | PF00687 | e4v4bBA2 | A: a+b two layers | X: a+b domain in Ribosomal protein L1 (From Topology) | H: a+b domain in Ribosomal protein L1 (From Topology) | T: a+b domain in Ribosomal protein L1 | F: PF00687 | ECOD (1.6) |
T [auth BA] | PF00687 | e4v4bBA1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Rossmann-like domain in Ribosomal protein L1 (From Topology) | T: Rossmann-like domain in Ribosomal protein L1 | F: PF00687 | ECOD (1.6) |
U [auth BB] | PF00181 | e4v4bBB1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: PF00181 | ECOD (1.6) |
U [auth BB] | PF03947 | e4v4bBB2 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF03947 | ECOD (1.6) |
V [auth BC] | PF00297 | e4v4bBC1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: PF00297 | ECOD (1.6) |
W [auth BD] | PF00573 | e4v4bBD1 | A: a/b three-layered sandwiches | X: Ribosomal protein L4 (From Topology) | H: Ribosomal protein L4 (From Topology) | T: Ribosomal protein L4 | F: PF00573 | ECOD (1.6) |
X [auth BE] | PF17144 | e4v4bBE1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF17144 | ECOD (1.6) |
Y [auth BF] | PF00327 | e4v4bBF1 | A: a+b two layers | X: Ribosomal protein L30p/L7e (From Topology) | H: Ribosomal protein L30p/L7e (From Topology) | T: Ribosomal protein L30p/L7e | F: PF00327 | ECOD (1.6) |
Z [auth BG] | PF01248 | e4v4bBG1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: L30e-like (From Topology) | T: L30e-like | F: PF01248 | ECOD (1.6) |
AA [auth BH] | PF00347 | e4v4bBH2 | A: a+b two layers | X: Ribosomal protein L6 (From Topology) | H: Ribosomal protein L6 (From Topology) | T: Ribosomal protein L6 | F: PF00347 | ECOD (1.6) |
BA [auth BI] | PF00252 | e4v4bBI1 | A: a+b complex topology | X: alpha/beta-Hammerhead/Barrel-sandwich hybrid | H: alpha/beta-Hammerhead/Barrel-sandwich hybrid | T: Ribosomal protein L10e | F: PF00252 | ECOD (1.6) |
CA [auth BJ] | PF00281,PF00673 | e4v4bBJ1 | A: a+b two layers | X: Ribosomal protein L5 (From Topology) | H: Ribosomal protein L5 (From Topology) | T: Ribosomal protein L5 | F: PF00281,PF00673 | ECOD (1.6) |
C [auth AB] | PF00318 | e4v4bAB1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Ribosomal protein S2/SIS domain (From Topology) | T: Ribosomal protein S2/SIS domain | F: PF00318 | ECOD (1.6) |
DA [auth BK] | PF00298 | e4v4bBK2 | A: alpha arrays | X: HTH | H: HTH | T: Ribosomal protein L11, C-terminal domain | F: PF00298 | ECOD (1.6) |
DA [auth BK] | PF03946 | e4v4bBK1 | A: a+b two layers | X: Ribosomal protein L11/L12e N-terminal domain-like | H: Ribosomal protein L11/L12e N-terminal domain (From Topology) | T: Ribosomal protein L11/L12e N-terminal domain | F: PF03946 | ECOD (1.6) |
EA [auth BL] | PF00827 | e4v4bBL1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal proteins S24e, L23 and L15e (From Topology) | T: Ribosomal proteins S24e, L23 and L15e | F: PF00827 | ECOD (1.6) |
FA [auth BM] | PF00572 | e4v4bBM1 | A: a/b three-layered sandwiches | X: Ribosomal protein L13/L15p/L18e/L32e | H: Ribosomal protein L13 and L16-A (From Topology) | T: Ribosomal protein L13 and L16-A | F: PF00572 | ECOD (1.6) |
GA [auth BN] | PF00237 | e4v4bBN1 | A: a+b two layers | X: Enolase-N/ribosomal protein | H: Ribosomal protein L22 (From Topology) | T: Ribosomal protein L22 | F: PF00237 | ECOD (1.6) |
HA [auth BO] | PF17135 | e4v4bBO1 | A: a/b three-layered sandwiches | X: Ribosomal protein L13/L15p/L18e/L32e | H: Ribosomal proteins L15p and L18e (From Topology) | T: Ribosomal proteins L15p and L18e | F: PF17135 | ECOD (1.6) |
IA [auth BP] | PF01280 | e4v4bBP1 | A: alpha arrays | X: Ribosomal protein L19 (L19e) N-terminal domain (From Topology) | H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology) | T: Ribosomal protein L19 (L19e) N-terminal domain | F: PF01280 | ECOD (1.6) |
IA [auth BP] | PF01280 | e4v4bBP2 | A: alpha bundles | X: Ribosomal protein L19 (L19e) C-terminal domain (From Topology) | H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology) | T: Ribosomal protein L19 (L19e) C-terminal domain | F: PF01280 | ECOD (1.6) |
JA [auth BQ] | PF01157 | e4v4bBQ1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF01157 | ECOD (1.6) |
KA [auth BR] | PF00238 | e4v4bBR1 | A: beta barrels | X: Ribosomal protein L14-like | H: Ribosomal protein L14-related (From Topology) | T: Ribosomal protein L14-related | F: PF00238 | ECOD (1.6) |
MA [auth BT] | PF00276 | e4v4bBT1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal proteins S24e, L23 and L15e (From Topology) | T: Ribosomal proteins S24e, L23 and L15e | F: PF00276 | ECOD (1.6) |
D [auth AC] | PF00189 | e4v4bAC2 | A: a+b two layers | X: T-fold | H: Ribosomal protein S3-C (From Topology) | T: Ribosomal protein S3-C | F: PF00189 | ECOD (1.6) |
D [auth AC] | PF07650 | e4v4bAC1 | A: a+b two layers | X: Alpha-lytic protease prodomain-like | H: KH-domains | T: Prokaryotic type KH domain (KH-domain type II) | F: PF07650 | ECOD (1.6) |
NA [auth BU] | PF16906 | e4v4bBU1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF16906 | ECOD (1.6) |
OA [auth BV] | PF00828 | e4v4bBV1 | A: a/b three-layered sandwiches | X: Ribosomal protein L13/L15p/L18e/L32e | H: Ribosomal proteins L15p and L18e (From Topology) | T: Ribosomal proteins L15p and L18e | F: PF00828 | ECOD (1.6) |
PA [auth B0] | PF01655 | e4v4bB01 | A: a/b three-layered sandwiches | X: Ribosomal protein L13/L15p/L18e/L32e | H: Ribosomal protein L32e (From Topology) | T: Ribosomal protein L32e | F: PF01655 | ECOD (1.6) |
QA [auth BW] | PF01198 | e4v4bBW1 | A: a+b two layers | X: Ribosomal protein L31e-like | H: Ribosomal protein L31e/gp120 outer domain (From Topology) | T: Ribosomal protein L31e/gp120 outer domain | F: PF01198 | ECOD (1.6) |
RA [auth BX] | PF00831 | e4v4bBX1 | A: alpha bundles | X: Long alpha-hairpin | H: Ribosomal protein L29 (L29p) (From Topology) | T: Ribosomal protein L29 (L29p) | F: PF00831 | ECOD (1.6) |
SA [auth BY] | PF01907 | e4v4bBY1 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: PF01907 | ECOD (1.6) |
TA [auth BZ] | PF00935 | e4v4bBZ1 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: PF00935 | ECOD (1.6) |
UA [auth B9] | PF01780 | e4v4bB91 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: PF01780 | ECOD (1.6) |
E [auth AD] | PF00163,PF01479 | e4v4bAD1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Alpha-L RNA-binding motif | F: PF00163,PF01479 | ECOD (1.6) |
F [auth AE] | PF03719 | e4v4bAE1 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: PF03719 | ECOD (1.6) |
F [auth AE] | PF00333 | e4v4bAE2 | A: a+b two layers | X: dsRBD-like | H: dsRNA-binding domain-like (From Topology) | T: dsRNA-binding domain-like | F: PF00333 | ECOD (1.6) |
G [auth AG] | PF00177 | e4v4bAG1 | A: alpha arrays | X: Ribosomal protein S7 (From Topology) | H: Ribosomal protein S7 (From Topology) | T: Ribosomal protein S7 | F: PF00177 | ECOD (1.6) |
H [auth AH] | PF00410 | e4v4bAH2 | A: a+b two layers | X: R3H domain-like | H: Ribosomal protein S8, N-terminal domain (From Topology) | T: Ribosomal protein S8, N-terminal domain | F: PF00410 | ECOD (1.6) |
H [auth AH] | PF00410 | e4v4bAH1 | A: a+b two layers | X: Ribosomal protein S8, C-terminal domain (From Topology) | H: Ribosomal protein S8, C-terminal domain (From Topology) | T: Ribosomal protein S8, C-terminal domain | F: PF00410 | ECOD (1.6) |
I [auth AI] | PF00380 | e4v4bAI1 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: PF00380 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
LA [auth BS] | PF01246 | Ribosomal protein L24e (Ribosomal_L24e) | Ribosomal protein L24e | - | Domain |
J [auth AJ] | PF00338 | Ribosomal protein S10p/S20e (Ribosomal_S10) | Ribosomal protein S10p/S20e | This family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. | Domain |
K [auth AK] | PF00411 | Ribosomal protein S11 (Ribosomal_S11) | Ribosomal protein S11 | - | Family |
N [auth AN] | PF00253 | Ribosomal protein S14p/S29e (Ribosomal_S14) | Ribosomal protein S14p/S29e | - | Family |
O [auth AO] | PF00312 | Ribosomal protein S15 (Ribosomal_S15) | Ribosomal protein S15 | - | Domain |
Q [auth AS] | PF00203 | Ribosomal protein S19 (Ribosomal_S19) | Ribosomal protein S19 | - | Domain |
B [auth AT] | PF00679 | Elongation factor G C-terminus (EFG_C) | Elongation factor G C-terminus | This domain includes the carboxyl terminal regions of Elongation factor G, elongation factor 2 and some tetracycline resistance proteins and adopt a ferredoxin-like fold. | Domain |
B [auth AT] | PF00009 | Elongation factor Tu GTP binding domain (GTP_EFTU) | Elongation factor Tu GTP binding domain | This domain contains a P-loop motif, also found in several other families such as Pfam:PF00071, Pfam:PF00025 and Pfam:PF00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains. | Domain |
B [auth AT] | PF14492 | Elongation Factor G, domain III (EFG_III) | Elongation Factor G, domain III | This domain is found in Elongation Factor G. It shares a similar structure with domain V (Pfam:PF00679). Structural studies in drosophila indicate this is domain 3 [1]. | Domain |
B [auth AT] | PF03144 | Elongation factor Tu domain 2 (GTP_EFTU_D2) | Elongation factor Tu domain 2 | Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA [1]. This domain is also found in other proteins such as e ... | Domain |
B [auth AT] | PF03764 | Elongation factor G, domain IV (EFG_IV) | Elongation factor G, domain IV | This domain is found in elongation factor G, elongation factor 2 and some tetracycline resistance proteins and adopts a ribosomal protein S5 domain 2-like fold. | Domain |
V [auth BC] | PF00297 | Ribosomal protein L3 (Ribosomal_L3) | Ribosomal protein L3 | - | Family |
W [auth BD] | PF00573 | Ribosomal protein L4/L1 family (Ribosomal_L4) | Ribosomal protein L4/L1 family | - | Family |
X [auth BE] | PF17144 | Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e) | Ribosomal large subunit proteins 60S L5, and 50S L18 | - | Family |
Y [auth BF] | PF00327 | Ribosomal protein L30p/L7e (Ribosomal_L30) | Ribosomal protein L30p/L7e | This family includes prokaryotic L30 and eukaryotic L7. | Domain |
Z [auth BG] | PF01248 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae) | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ... | Domain |
AA [auth BH] | PF00347 | Ribosomal protein L6 (Ribosomal_L6) | Ribosomal protein L6 | - | Domain |
BA [auth BI] | PF00252 | Ribosomal protein L16p/L10e (Ribosomal_L16) | Ribosomal protein L16p/L10e | - | Domain |
C [auth AB] | PF00318 | Ribosomal protein S2 (Ribosomal_S2) | Ribosomal protein S2 | - | Family |
EA [auth BL] | PF00827 | Ribosomal L15 (Ribosomal_L15e) | Ribosomal L15 | - | Family |
FA [auth BM] | PF00572 | Ribosomal protein L13 (Ribosomal_L13) | Ribosomal protein L13 | - | Family |
GA [auth BN] | PF00237 | Ribosomal protein L22p/L17e (Ribosomal_L22) | Ribosomal protein L22p/L17e | This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. | Domain |
JA [auth BQ] | PF01157 | Ribosomal protein L21e (Ribosomal_L21e) | Ribosomal protein L21e | - | Family |
MA [auth BT] | PF00276 | Ribosomal protein L23 (Ribosomal_L23) | Ribosomal protein L23 | - | Family |
D [auth AC] | PF07650 | KH domain (KH_2) | KH domain | - | Domain |
D [auth AC] | PF00189 | Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C) | Ribosomal protein S3, C-terminal domain | This family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. | Domain |
NA [auth BU] | PF16906 | Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26) | Ribosomal proteins L26 eukaryotic, L24P archaeal | - | Family |
NA [auth BU] | PF00467 | KOW motif (KOW) | KOW motif | - | Family |
OA [auth BV] | PF00828 | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A) | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A | - | Family |
PA [auth B0] | PF01655 | Ribosomal protein L32 (Ribosomal_L32e) | Ribosomal protein L32 | - | Family |
SA [auth BY] | PF01907 | Ribosomal protein L37e (Ribosomal_L37e) | Ribosomal protein L37e | - | Family |
E [auth AD] | PF00163 | Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4) | Ribosomal protein S4/S9 N-terminal domain | - | Family |
E [auth AD] | PF01479 | S4 domain (S4) | S4 domain | The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ... | Domain |
F [auth AE] | PF03719 | Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C) | Ribosomal protein S5, C-terminal domain | - | Domain |
F [auth AE] | PF00333 | Ribosomal protein S5, N-terminal domain (Ribosomal_S5) | Ribosomal protein S5, N-terminal domain | - | Domain |
G [auth AG] | PF00177 | Ribosomal protein S7p/S5e (Ribosomal_S7) | Ribosomal protein S7p/S5e | This family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. | Domain |