4O8W | pdb_00004o8w

Crystal Structure of the GerD spore germination protein


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
FGerDe4o8wF1 A: a/b three-layered sandwichesX: TIM beta/alpha-barrelH: gamma-Crystallin-likeT: gamma-Crystallin-likeF: GerDECOD (v294.1)
EGerDe4o8wE1 A: a/b three-layered sandwichesX: TIM beta/alpha-barrelH: gamma-Crystallin-likeT: gamma-Crystallin-likeF: GerDECOD (v294.1)
De4o8wD1 A: a/b three-layered sandwichesX: Rossmann-likeH: gamma-Crystallin-likeT: gamma-Crystallin-likeF:ECOD (v294.1)
Cp450e4o8wC1 A: a/b three-layered sandwichesX: DEATH domainH: HTHT: winged helix domainF: p450ECOD (v294.1)
Bp450e4o8wB1 A: a/b three-layered sandwichesX: DEATH domainH: HTHT: winged helix domainF: p450ECOD (v294.1)
Ap450e4o8wA1 A: a/b three-layered sandwichesX: DEATH domainH: HTHT: winged helix domainF: p450ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF17898Spore germination GerD central core domain (GerD)Spore germination GerD central core domainThis is the central core domain found in GerD from a thermophilic Bacillus. GerD plays a critical role in nutrient receptor-mediated spore germination in Bacillus species. The crystal structure of GerD reveals this domain as a trimeric superhelical r ...This is the central core domain found in GerD from a thermophilic Bacillus. GerD plays a critical role in nutrient receptor-mediated spore germination in Bacillus species. The crystal structure of GerD reveals this domain as a trimeric superhelical rope fold. Alterations in GerD structure have profound effects on spores' nutrient germination [1].
Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR041262Spore germination GerD, central core domainDomain