4N0R | pdb_00004n0r

Crystal structure of a putative glycoside hydrolase (BVU_0362) from Bacteroides vulgatus ATCC 8482 at 1.80 A resolution

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B Superfamily(Trans)glycosidases 8092267 3000313 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyE set domains 8092266 3000070 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyGlycosyl hydrolase domain-like 8092268 3001528 SCOP2B (2022-06-29)
ASCOP2 FamilyBVU_0362 N-terminal domain-like 8045823 4004709 SCOP2 (2022-06-29)
ASCOP2 FamilyGH5 catalytic domain-like 8048377 4006076 SCOP2 (2022-06-29)
ASCOP2 FamilyBVU_0362 C-terminal domain-like 8092265 4007767 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyE set domains 8092266 3000070 SCOP2 (2022-06-29)
ASCOP2 Superfamily(Trans)glycosidases 8092267 3000313 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyGlycosyl hydrolase domain-like 8092268 3001528 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BUNK_F_TYPEe4n0rB1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: UNK_F_TYPEECOD (1.6)
BEUF07808e4n0rB2 A: beta sandwichesX: Glycosyl hydrolase domain-likeH: Glycosyl hydrolase domain (From Topology)T: Glycosyl hydrolase domainF: EUF07808ECOD (1.6)
BDUF4038e4n0rB3 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: DUF4038ECOD (1.6)
AUNK_F_TYPEe4n0rA1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: UNK_F_TYPEECOD (1.6)
AEUF07808e4n0rA3 A: beta sandwichesX: Glycosyl hydrolase domain-likeH: Glycosyl hydrolase domain (From Topology)T: Glycosyl hydrolase domainF: EUF07808ECOD (1.6)
ADUF4038e4n0rA2 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: DUF4038ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.2.0)
B3.20.20.80 Alpha Beta Alpha-Beta Barrel TIM Barrel GlycosidasesCATH (4.2.0)
B2.60.40.3950 Mainly Beta Sandwich Immunoglobulin-like CATH (4.2.0)
A2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.2.0)
A3.20.20.80 Alpha Beta Alpha-Beta Barrel TIM Barrel GlycosidasesCATH (4.2.0)
A2.60.40.3950 Mainly Beta Sandwich Immunoglobulin-like CATH (4.2.0)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR041239Domain of unknown function DUF5605Domain
A, B
IPR032260Domain of unknown function DUF5060Domain
A, B
IPR013783Immunoglobulin-like foldHomologous Superfamily
A, B
IPR017853Glycoside hydrolase superfamilyHomologous Superfamily
A, B
IPR025277Apiosidase-like, catalytic domainDomain