4N0R | pdb_00004n0r

Crystal structure of a putative glycoside hydrolase (BVU_0362) from Bacteroides vulgatus ATCC 8482 at 1.80 A resolution

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B Superfamily(Trans)glycosidases 8092267 3000313 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyE set domains 8092266 3000070 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyGlycosyl hydrolase domain-like 8092268 3001528 SCOP2B (2022-06-29)
ASCOP2 FamilyBVU_0362 N-terminal domain-like 8045823 4004709 SCOP2 (2022-06-29)
ASCOP2 FamilyGH5 catalytic domain-like 8048377 4006076 SCOP2 (2022-06-29)
ASCOP2 FamilyBVU_0362 C-terminal domain-like 8092265 4007767 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyE set domains 8092266 3000070 SCOP2 (2022-06-29)
ASCOP2 Superfamily(Trans)glycosidases 8092267 3000313 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyGlycosyl hydrolase domain-like 8092268 3001528 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Be4n0rB1 A: Ribonuclease H-likeX: Ribonuclease H-likeH: Ribonuclease H-likeT: An_peroxidaseF:ECOD (20:10:01)
Ae4n0rA1 A: TIM beta/alpha-barrelX: TIM barrelsH: TIM barrelsT: DUF4038F:ECOD (20:10:01)
Ae4n0rA3 A: TIM beta/alpha-barrelX: TIM barrelsH: TIM barrelsT: RNA_pol_I_A49F:ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
B3.20.20.80 Alpha Beta Alpha-Beta Barrel TIM Barrel GlycosidasesCATH (4.3.0)
B2.60.40.3950 Mainly Beta Sandwich Immunoglobulin-like CATH (4.3.0)
A2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
A3.20.20.80 Alpha Beta Alpha-Beta Barrel TIM Barrel GlycosidasesCATH (4.3.0)
A2.60.40.3950 Mainly Beta Sandwich Immunoglobulin-like CATH (4.3.0)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR041239Domain of unknown function DUF5605Domain
A, B
IPR032260Domain of unknown function DUF5060Domain
A, B
IPR013783Immunoglobulin-like foldHomologous Superfamily
A, B
IPR017853Glycoside hydrolase superfamilyHomologous Superfamily
A, B
IPR025277Apiosidase-like, catalytic domainDomain