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4M6F
|
pdb_00004m6f
Dimer of the G-Segment Invertase bound to a DNA substrate
External Resource: Annotation
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Domain Annotation: SCOP2 Classification
SCOP2 Database Homepage
Chains
Type
Family Name
Domain Identifier
Family Identifier
Provenance Source (Version)
A
SCOP2B Superfamily
Resolvase-like
8071360
3000065
SCOP2B (2022-06-29)
Domain Annotation: ECOD Classification
ECOD Database Homepage
Chains
Family Name
Domain Identifier
Architecture
Possible Homology
Homology
Topology
Family
Provenance Source (Version)
A
e4m6fA1
A: Single-stranded left-handed beta-helix
X: Immunoglobulin-related
H: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
T: ZP-N
F:
ECOD (20:10:01)
Protein Family Annotation
Pfam Database Homepage
Chains
Accession
Name
Description
Comments
Source
A
PF00239
Resolvase, N terminal domain (Resolvase)
Resolvase, N terminal domain
The N-terminal domain of the resolvase family (this family) contains the active site and the dimer interface. The extended arm at the C-terminus of this domain connects to the C-terminal helix-turn-helix domain of resolvase - see Pfam:PF02796.
Domain
A
PF02796
Helix-turn-helix domain of resolvase (HTH_7)
Helix-turn-helix domain of resolvase
Domain
Gene Ontology: Gene Product Annotation
Gene Ontology Database Homepage
Chains
Polymer
Molecular Function
Biological Process
Cellular Component
C
gix site analog
-
-
-
B
gix site analog
-
-
-
A
DNA-invertase
DNA binding
binding
nucleic acid binding
hydrolase activity
catalytic activity
ligase activity
catalytic activity, acting on DNA
catalytic activity, acting on a nucleic acid
DNA strand exchange activity
biological process involved in interspecies interaction between organisms
symbiont entry into host cell
viral process
symbiont entry into host
viral life cycle
biological process involved in interaction with host
biological process involved in symbiotic interaction
nucleobase-containing compound metabolic process
metabolic process
cellular process
primary metabolic process
DNA metabolic process
macromolecule metabolic process
DNA integration
biological process involved in interspecies interaction between organisms
symbiont entry into host cell
viral process
symbiont entry into host
viral life cycle
biological process involved in interaction with host
biological process involved in symbiotic interaction
nucleobase-containing compound metabolic process
metabolic process
cellular process
primary metabolic process
DNA metabolic process
macromolecule metabolic process
DNA integration
nucleic acid metabolic process
viral tropism switching
Less
host cellular component
host intracellular part
cellular anatomical structure
host cell cytoplasm
host cell part
host intracellular region
other organism part
InterPro: Protein Family Classification
InterPro Database Homepage
Chains
Accession
Name
Type
A
IPR009057
Homedomain-like superfamily
Homologous Superfamily
A
IPR006118
Recombinase, conserved site
Conserved Site
A
IPR006119
Resolvase, N-terminal catalytic domain
Domain
A
IPR006120
Resolvase, HTH domain
Domain
A
IPR036162
Resolvase-like, N-terminal catalytic domain superfamily
Homologous Superfamily
A
IPR050639
Site-specific recombinase resolvase
Family
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