4JGW
The conformation of a docking site for SH3 domains is pre-selected in the Guanine Nucleotide Exchange Factor Rlf
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Ras GEF | 8018955 | 4001268 | SCOP2 (2022-06-29) |
A | SCOP2 Family | REM (Ras exchange motif)-like | 8018961 | 4000381 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Ras GEF | 8018965 | 3000128 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | ENTH/VHS domain-like | 8018962 | 3000164 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Ras GEF | 8018965 | 3000128 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | ENTH/VHS domain-like | 8018962 | 3000164 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | RasGEF | e4jgwA1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Ras GEF (From Topology) | T: Ras GEF | F: RasGEF | ECOD (1.6) |
B | RasGEF | e4jgwB1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Ras GEF (From Topology) | T: Ras GEF | F: RasGEF | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.870.10 | Mainly Alpha | Up-down Bundle | Son of sevenless (SoS) protein | Chain S, domain 1 | CATH (4.3.0) |
A | 1.10.840.10 | Mainly Alpha | Orthogonal Bundle | Son of Sevenless (SoS) protein | Chain S, domain 2 | CATH (4.3.0) |
B | 1.20.870.10 | Mainly Alpha | Up-down Bundle | Son of sevenless (SoS) protein | Chain S, domain 1 | CATH (4.3.0) |
B | 1.10.840.10 | Mainly Alpha | Orthogonal Bundle | Son of Sevenless (SoS) protein | Chain S, domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00617 | RasGEF domain (RasGEF) | RasGEF domain | - | Family | |
PF00618 | RasGEF N-terminal motif (RasGEF_N) | RasGEF N-terminal motif | A subset of guanine nucleotide exchange factor for Ras-like small GTPases appear to possess this motif/domain N-terminal to the RasGef (Cdc25-like) domain. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000159 | Ras-associating domain | Domain | |
IPR008937 | Ras-like guanine nucleotide exchange factor | Family | |
IPR019804 | Ras guanine-nucleotide exchange factor, conserved site | Conserved Site | |
IPR000651 | Ras-like guanine nucleotide exchange factor, N-terminal | Domain | |
IPR036964 | Ras guanine-nucleotide exchange factor, catalytic domain superfamily | Homologous Superfamily | |
IPR023578 | Ras guanine nucleotide exchange factor domain superfamily | Homologous Superfamily | |
IPR001895 | Ras guanine-nucleotide exchange factors catalytic domain | Domain | |
IPR029071 | Ubiquitin-like domain superfamily | Homologous Superfamily |