4HKJ
Structure of Cowpox CPXV203 in complex with MHCI (H-2Kb)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054611 | 3000071 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | MHC antigen-recognition domain | 8036210 | 3000521 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | MHC antigen-recognition domain | 8036210 | 3000521 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054611 | 3000071 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | MHC antigen-recognition domain | 8036210 | 3000521 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054611 | 3000071 | SCOP2B (2022-06-29) |
M | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054611 | 3000071 | SCOP2B (2022-06-29) |
M | SCOP2B Superfamily | MHC antigen-recognition domain | 8036210 | 3000521 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8003766 | 3000071 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8003766 | 3000071 | SCOP2B (2022-06-29) |
J | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8003766 | 3000071 | SCOP2B (2022-06-29) |
N | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8003766 | 3000071 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | VCCI-like | 8046023 | 3001493 | SCOP2B (2022-06-29) |
H | SCOP2 Family | CPXV203-like | 8046020 | 4004828 | SCOP2 (2022-06-29) |
H | SCOP2 Superfamily | VCCI-like | 8046023 | 3001493 | SCOP2 (2022-06-29) |
L | SCOP2B Superfamily | VCCI-like | 8046023 | 3001493 | SCOP2B (2022-06-29) |
P | SCOP2B Superfamily | VCCI-like | 8046023 | 3001493 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | C1-set_2 | e4hkjA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_2 | ECOD (1.6) |
A | MHC_I | e4hkjA2 | A: a+b two layers | X: MHC antigen-recognition domain (From Topology) | H: MHC antigen-recognition domain (From Topology) | T: MHC antigen-recognition domain | F: MHC_I | ECOD (1.6) |
E | C1-set_2 | e4hkjE1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_2 | ECOD (1.6) |
E | MHC_I | e4hkjE2 | A: a+b two layers | X: MHC antigen-recognition domain (From Topology) | H: MHC antigen-recognition domain (From Topology) | T: MHC antigen-recognition domain | F: MHC_I | ECOD (1.6) |
I | C1-set_2 | e4hkjI1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_2 | ECOD (1.6) |
I | MHC_I | e4hkjI2 | A: a+b two layers | X: MHC antigen-recognition domain (From Topology) | H: MHC antigen-recognition domain (From Topology) | T: MHC antigen-recognition domain | F: MHC_I | ECOD (1.6) |
M | C1-set_2 | e4hkjM1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_2 | ECOD (1.6) |
M | MHC_I | e4hkjM2 | A: a+b two layers | X: MHC antigen-recognition domain (From Topology) | H: MHC antigen-recognition domain (From Topology) | T: MHC antigen-recognition domain | F: MHC_I | ECOD (1.6) |
B | C1-set_2 | e4hkjB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_2 | ECOD (1.6) |
F | C1-set_2 | e4hkjF1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_2 | ECOD (1.6) |
J | C1-set_2 | e4hkjJ1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_2 | ECOD (1.6) |
N | C1-set_2 | e4hkjN1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_2 | ECOD (1.6) |
D | Pox_T4_C | e4hkjD1 | A: beta sandwiches | X: Soluble secreted chemokine inhibitor, VCCI (From Topology) | H: Soluble secreted chemokine inhibitor, VCCI (From Topology) | T: Soluble secreted chemokine inhibitor, VCCI | F: Pox_T4_C | ECOD (1.6) |
H | Pox_T4_C | e4hkjH1 | A: beta sandwiches | X: Soluble secreted chemokine inhibitor, VCCI (From Topology) | H: Soluble secreted chemokine inhibitor, VCCI (From Topology) | T: Soluble secreted chemokine inhibitor, VCCI | F: Pox_T4_C | ECOD (1.6) |
L | Pox_T4_C | e4hkjL1 | A: beta sandwiches | X: Soluble secreted chemokine inhibitor, VCCI (From Topology) | H: Soluble secreted chemokine inhibitor, VCCI (From Topology) | T: Soluble secreted chemokine inhibitor, VCCI | F: Pox_T4_C | ECOD (1.6) |
P | Pox_T4_C | e4hkjP1 | A: beta sandwiches | X: Soluble secreted chemokine inhibitor, VCCI (From Topology) | H: Soluble secreted chemokine inhibitor, VCCI (From Topology) | T: Soluble secreted chemokine inhibitor, VCCI | F: Pox_T4_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
MH1-K1b (H2-K1b) | I-ALPHA | Mus musculus (house mouse) | MH1-K1b | G-DOMAIN G-ALPHA1, G-DOMAIN G-ALPHA2, C-LIKE-DOMAIN C-LIKE | MH | MH1-ALPHA_B2M | IMGT (202415-0) | |
MH1-K1b (H2-K1b) | B2M | Mus musculus (house mouse) | B2M*01, B2M*02 | C-LIKE-DOMAIN C-LIKE | MH | MH1-ALPHA_B2M | IMGT (202415-0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00129 | Class I Histocompatibility antigen, domains alpha 1 and 2 (MHC_I) | Class I Histocompatibility antigen, domains alpha 1 and 2 | - | Domain | |
PF07654 | Immunoglobulin C1-set domain (C1-set) | Immunoglobulin C1-set domain | - | Domain | |
PF07654 | Immunoglobulin C1-set domain (C1-set) | Immunoglobulin C1-set domain | - | Domain | |
PF00079 | Serpin (serine protease inhibitor) (Serpin) | Serpin (serine protease inhibitor) | Structure is a multi-domain fold containing a bundle of helices and a beta sandwich. | Domain | |
PF04491 | Poxvirus T4 protein, N terminus (Pox_T4_N) | Poxvirus T4 protein, N terminus | - | Family | |
PF04490 | Poxvirus T4 protein, C terminus (Pox_T4_C) | Poxvirus T4 protein, C terminus | - | Family |