4H3W | pdb_00004h3w

Crystal structure of a putative secreted protein (BDI_1231) from Parabacteroides distasonis ATCC 8503 at 2.00 A resolution

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Putative secreted protein BDI_1231-like	8051205	4007246	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Putative secreted protein BDI_1231-like	8102530	3002734	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Putative secreted protein BDI_1231-like	8102531	3002734	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Putative secreted protein BDI_1231-like	8102530	3002734	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Putative secreted protein BDI_1231-like	8102531	3002734	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	DUF4621	e4h3wA1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Prealbumin-like	F: DUF4621	ECOD (v294.1)
B	SNase	e4h3wB1	A: a/b three-layered sandwiches	X: Transmembrane heme-binding four-helical bundle	H: Anticodon-binding domain of Class II aaRS	T: Anticodon-binding domain of Class II aaRS	F: SNase	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.60.290.20	Mainly Beta	Sandwich	Hypothetical Protein Tm1070	Chain: A	CATH (4.3.0)
A	2.60.120.1260	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
B	2.60.290.20	Mainly Beta	Sandwich	Hypothetical Protein Tm1070	Chain: A	CATH (4.3.0)
B	2.60.120.1260	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR027977	Protein of unknown function DUF4621	Family

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
A, B	MLY	Parent Component: LYS RESID: AA0075 PSI-MOD : N6,N6-dimethyl-L-lysine MOD:00084
A, B	MSE	Parent Component: MET RESID: AA0075

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.