Structural basis of Rpl5 recognition by Syo1
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B [auth A] | PRDM2_PR | e4gmnA2 | A: alpha bundles | X: Subtilisin-like | H: Subtilisin-like | T: Subtilisin-like | F: PRDM2_PR | ECOD (develop294) |
| A [auth B] | Hemagglutinin | e4gmnB01 | A: alpha bundles | X: Rossmann-like | H: P-loop domains-related | T: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | F: Hemagglutinin | ECOD (develop294) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B [auth A] | 1.25.10.10 | Mainly Alpha | Alpha Horseshoe | Leucine-rich Repeat Variant | Leucine-rich Repeat Variant | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| B [auth A] | PF25567 | SYO1-like, TPR repeats (TPR_SYO1) | SYO1-like, TPR repeats | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| B [auth A] | IPR057990 | SYO1-like, TPR repeats | Domain |
| B [auth A] | IPR011989 | Armadillo-like helical | Homologous Superfamily |
| B [auth A] | IPR016024 | Armadillo-type fold | Homologous Superfamily |
| B [auth A] | IPR052616 | SYO1-like | Family |
| A [auth B] | IPR057268 | Large ribosomal subunit protein uL18 | Family |
| A [auth B] | IPR005485 | Large ribosomal subunit protein uL18, eukaryota/archaea | Family |
| A [auth B] | IPR025607 | Large ribosomal subunit protein uL18, C-terminal, eukaryotes | Domain |














