4GKP

Structure of the truncated neck and C-terminal motor homology domain of ViK1 from Candida glabrata

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	P-loop motor domain	8093001	3002036	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	P-loop motor domain	8093001	3002036	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Microtub_bd	e4gkpA3	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Microtub_bd	ECOD (1.6)
B	Microtub_bd	e4gkpB3	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Microtub_bd	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.40.850.20	Alpha Beta	3-Layer(aba) Sandwich	Kinesin		CATH (4.3.0)
B	3.40.850.20	Alpha Beta	3-Layer(aba) Sandwich	Kinesin		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF16796	Microtubule binding (Microtub_bd)	Microtubule binding	This motor homology domain binds microtubules and lacks an ATP-binding site [1-2].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Spindle pole body-associated protein VIK1	cytoskeletal protein binding microtubule binding protein binding binding tubulin binding	microtubule-based process cellular process	protein-containing complex intracellular anatomical structure cellular anatomical entity intracellular organelle cytoskeleton organelle intracellular non-membrane-bounded organelle microtubule associated complex kinesin complex microtubule cytoskeleton non-membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR031852	Spindle pole body-associated protein Vik1/Cik1, microtubule binding domain	Domain

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.