4FVS | pdb_00004fvs

Crystal structure of a putative lipoprotein (BDI_3050) from Parabacteroides distasonis ATCC 8503 at 2.70 A resolution

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ADUF3108_likee4fvsA1 A: beta barrelsX: YmcC-like (From Topology)H: YmcC-like (From Topology)T: YmcC-likeF: DUF3108_likeECOD (1.6)
BDUF3108_likee4fvsB1 A: beta barrelsX: YmcC-like (From Topology)H: YmcC-like (From Topology)T: YmcC-likeF: DUF3108_likeECOD (1.6)
CDUF3108_likee4fvsC1 A: beta barrelsX: YmcC-like (From Topology)H: YmcC-like (From Topology)T: YmcC-likeF: DUF3108_likeECOD (1.6)
DDUF3108_likee4fvsD1 A: beta barrelsX: YmcC-like (From Topology)H: YmcC-like (From Topology)T: YmcC-likeF: DUF3108_likeECOD (1.6)
EDUF3108_likee4fvsE1 A: beta barrelsX: YmcC-like (From Topology)H: YmcC-like (From Topology)T: YmcC-likeF: DUF3108_likeECOD (1.6)
FDUF3108_likee4fvsF1 A: beta barrelsX: YmcC-like (From Topology)H: YmcC-like (From Topology)T: YmcC-likeF: DUF3108_likeECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.40.360.20 Mainly Beta Beta Barrel YmcC-like fold CATH (4.2.0)
B2.40.360.20 Mainly Beta Beta Barrel YmcC-like fold CATH (4.2.0)
C2.40.360.20 Mainly Beta Beta Barrel YmcC-like fold CATH (4.2.0)
D2.40.360.20 Mainly Beta Beta Barrel YmcC-like fold CATH (4.2.0)
E2.40.360.20 Mainly Beta Beta Barrel YmcC-like fold CATH (4.2.0)
F2.40.360.20 Mainly Beta Beta Barrel YmcC-like fold CATH (4.2.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF21347DUF3108-like (DUF3108_like)DUF3108-likeThis is a domain found in bacteria which adopts a beta-barrel fold of the YmcC-like type. Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR049279DUF3108-likeDomain