4FVS | pdb_00004fvs

Crystal structure of a putative lipoprotein (BDI_3050) from Parabacteroides distasonis ATCC 8503 at 2.70 A resolution

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
FABC_trane4fvsF1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: ABC_tranECOD (v294.1)
EABC_trane4fvsE1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: ABC_tranECOD (v294.1)
DABC_trane4fvsD1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: ABC_tranECOD (v294.1)
CABC_trane4fvsC1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: ABC_tranECOD (v294.1)
BABC_trane4fvsB1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: ABC_tranECOD (v294.1)
ADUF4488e4fvsA1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: hypothetical protein BACOVA_00364T: hypothetical protein BACOVA_00364F: DUF4488ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
F2.40.360.20 Mainly Beta Beta Barrel YmcC-like fold CATH (4.3.0)
E2.40.360.20 Mainly Beta Beta Barrel YmcC-like fold CATH (4.3.0)
D2.40.360.20 Mainly Beta Beta Barrel YmcC-like fold CATH (4.3.0)
C2.40.360.20 Mainly Beta Beta Barrel YmcC-like fold CATH (4.3.0)
B2.40.360.20 Mainly Beta Beta Barrel YmcC-like fold CATH (4.3.0)
A2.40.360.20 Mainly Beta Beta Barrel YmcC-like fold CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF21347DUF3108-like (DUF3108_like)DUF3108-likeThis is a domain found in bacteria which adopts a beta-barrel fold of the YmcC-like type. Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR049279DUF3108-likeDomain